PROP_HUMAN/2-0 WSGWGP---WE-PCS---VTCSKG---------TRTRRR--------ACNHPAP------ CONSENSUS/80% ht.as. ..Ws..Co....sCu.s... ..hp.R.c..................... CONSENSUS/65% hstWup ..Wo.sCS...hoCGtG... ..hptRpR........sts.........t CONSENSUS/50% WusWos ..WS.sCS...soCGpG... ..h+pRpR........ssss.......ss PROP_HUMAN/2-0 -KCGGHCPG--------QAQESEACDTQ---QVCP CONSENSUS/80% ..C......... .....p.p.C........C. CONSENSUS/65% ttCts....... .....cpc.Cpht.....Cs CONSENSUS/50% psCsutt..... .....EscsCstp....sCs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |