Consensus terms for the TSP1 domain

PROP_HUMAN/2-0   WSGWGP---WE-PCS---VTCSKG---------TRTRRR--------ACNHPAP------
CONSENSUS/80%    ht.as. ..Ws..Co....sCu.s...    ..hp.R.c.....................
CONSENSUS/65%    hstWup ..Wo.sCS...hoCGtG...    ..hptRpR........sts.........t
CONSENSUS/50%    WusWos ..WS.sCS...soCGpG...    ..h+pRpR........ssss.......ss


PROP_HUMAN/2-0   -KCGGHCPG--------QAQESEACDTQ---QVCP
CONSENSUS/80%    ..C.........   .....p.p.C........C.
CONSENSUS/65%    ttCts.......   .....cpc.Cpht.....Cs
CONSENSUS/50%    psCsutt.....   .....EscsCstp....sCs

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T