CA15_HUMAN/1-1 PADLLKVLDFHNLPDGITKTTGFCAT---RRSSKGPDVAYRVTK----DAQLSAPTKQLY CONSENSUS/80% t.t.hphhsh.t.....pph.s.t..............hh.h...........t.st.hh CONSENSUS/65% shshhphhslhp...thppssuhp..............sahht.....ss..spsspplh CONSENSUS/50% uhcllpslDLsspssulc+ssuhcs..........sssAY+lsc....sussspsocpLa CA15_HUMAN/1-1 PASAFPEDFSILTTVKAKK---GSQAFLVSIYNE-QGIQQIGLEL-----GRSPVFLYED CONSENSUS/80% ...th.ptaslhhhhp......ppthslhtlhst.pth..htl.......Gt.p.h.h.. CONSENSUS/65% P..th.c-aslhshh+.t....ppsssLaslhst.psh..ltlpls....Gptppl.hph CONSENSUS/50% P.puhsc-FolLsolRtss...cssusLauIpcs.psppplulcls....G+psslplca CA15_HUMAN/1-1 HTGKPGPEDYPLFRG---INLSDGKWHRIALSVHKKN-----VTLILDCKKKTTKF-LDR CONSENSUS/80% ..t.psp.ps..hp....h.lhsspa+plhl.lpttp.....hpLhlDCp.h.ph..l.. CONSENSUS/65% ..stsGp.psssFp....htLhDupWH+ltltlpupp.....hpLalDCpphtphs.lst CONSENSUS/50% ..sscGchcsssFct...hsLADG+WH+lsLuVsups.....lsLYVDCcchss+s.Lcc CA15_HUMAN/1-1 SD---HPMIDINGIIVFGTRIL----DEEVFEGDIQQLLFVSDH CONSENSUS/80% .........pstuh.hhhtth.........hph.lpphtlhhts CONSENSUS/65% st.......pssGhtlhstptt.....tt.hps.lQplpllhss CONSENSUS/50% ss.....slcscGlplhsspsst...tpcsFpGpLQpl+IVsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |