28985.KLLA0C18381g_from_264_to------------KSVIKLLIVCVRKTFPL-DLLGSN---------SNYSVLSKAIAILVK CONSENSUS/80% .............pVh.hlh.hhpplhs..thhGst.........pstthhhpplt.hlp CONSENSUS/65% ............hpVhtFlhthlpclhPt.plaGop.........cNpphhhpplptFlp CONSENSUS/50% ............ppVhsFlRssLc+llPp.sLWGSp.........+Ncpplh+slcpFls 28985.KLLA0C18381g_from_264_toKP----LHSKILFDELCKGLRVK----------DVKW-LETRRLPAGEQTQK-------- CONSENSUS/80% h.....p.tph.hpphh.thplp..........ph.Wht........t.tt......... CONSENSUS/65% h.....+atphslpplhhph+lp..........-htWLt.......hptttt........ CONSENSUS/50% L.....+ac+loLpELhpcl+Vs..........DssWLp.......tspssp........ 28985.KLLA0C18381g_from_264_to-----IPYYDVKNRQALLYKLFFWILSCYVPKLLSTFFYVTELS---STVDIVYIRHDTW CONSENSUS/80% .........ch.hp.tlhhphlhalhpthl..llps.FYhTEs.....p.plhaaRpt.W CONSENSUS/65% .....hstt-hphRptlhtpFlhWLhsshlh.Ll+shFYsTEosh..pp.plhaaR+slW CONSENSUS/50% ....hlstuEtchRcclLucFlaWLhcsaVlsLLRoaFYlTEooh..p+sclhaaR+clW 28985.KLLA0C18381g_from_264_toKTMSQPFLKSYFR CONSENSUS/80% tpltp.hhtphht CONSENSUS/65% p+lpp.tlpphhp CONSENSUS/50% s+Lsshsl+pahc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |