Consensus terms for the TilS_C domain

122586.NMB1140_from_350_to_422GILRTV-AA-SDTLAM------GGIH-KDVKKILQGKRVLPVLRPIWPLVAD----SGNR
CONSENSUS/80%    l.l+.t....utthh........ttt.+pl+chh.-.tlP...Rtphsllh......stp
CONSENSUS/65%    lplRhp.ps.G-pht......stttp.+clKcla.-tplP.h.RsphPllh......spp
CONSENSUS/50%    lslRhR.ps.G-+lph....hGpsus.+KLK+lap-t+lPsapRcclPLLh.....hscc


122586.NMB1140_from_350_to_422P-LAL----ANCCADFQ-----YSVSDGILPVH-----------PDF
CONSENSUS/80%    l.hhh.....shhhtt.............t..............l.h
CONSENSUS/65%    l.lhl....sGhhhspt..........tttth............lth
CONSENSUS/50%    l.lhl....sGltlspp.......hspsspsh............lpa

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T