148807318 MRL--------------------------------------------------------- CONSENSUS/80% M........................................................... CONSENSUS/65% M........................................................... CONSENSUS/50% M....................................slps................... 148807318 -VFATKDLAVA-----GRSFEGFPLLVGA-DGWPVEPA-QSFLWHTLVESGEALSALTWE CONSENSUS/80% ..hh.ptl.........ttttth.hllts.sthsltsl.pcal.phhhph.t..S.NTl+ CONSENSUS/65% .lhtspsl.........tstpchahllss.sshslcsl.p+aL.phhpps.t..S.NTl+ CONSENSUS/50% .lhtscsIss.......sssccpahVLc-.-GtPlEPl.p+YL.cahssss+..SsNTLR 148807318 AYGRRLFDYFAFLEANGL---AWNEES------QADGLSVLSRYRD-------------W CONSENSUS/80% uYuhplt.ahpaLtppp....sapc........phpthstFhtahc.............h CONSENSUS/65% uYuhsLthaapFLpppph...sWp-l.......ph-slstFhpaL+.....tp..th..h CONSENSUS/50% AYAacLpsWacFLE-+sL...cW+-V.......sl-clusFlpWLR....hGs..chs.l 148807318 SSGELELDPSTLNKRLNLIVRFYQWAKQR-DLIAALPFGERR----VRAT-PHSGFLSHV CONSENSUS/80% s..t.hhsttohNhhlssl.pFYpahhtt.c.hss....ch...hhs.tp.shtshL.hl CONSENSUS/65% sssptphosuolNthlsslhpFYcathpp.ctlsst.ht+h...lhspsp.shpshLhtl CONSENSUS/50% usssschSAuTlNppLuAVsuFYcatt+c.-sluus.asRLpt.lusRuR.sa+uFLssl 148807318 ---ARPNAESTKPSVMVRERKRLTKFLTKDQAKVCLALD--------------------A CONSENSUS/80% ...sht+.......h..pt.pthsthlp.tphthhhsss....................s CONSENSUS/65% ...uht+sp..h..hhh+ttppcs+hls.pplphllssC....................s CONSENSUS/50% ...u+c+spsp+.llhL+ss+u+PRsLocEQlcslLDuC....................s 148807318 DPSHRILFHLMVRTGLRSCEARTFPFKYVFNPRLKKGLRP-GQMISVALEPSDMHLKY-G CONSENSUS/80% shRcphLhtlLhpTGhRlsEAhsLhh...p-h.htts....hplh.p..p.ssschKs.. CONSENSUS/65% shRD+hLhtLLhcTGhRlGEALuLhh...pDlthtsst...lplppR..p.ssucsKs.t CONSENSUS/50% sLRD+FLhpLLsETGlRIGEALuLpa...cDlchucGst..Icl+sRtcpsNuARlKu.s 148807318 RPRTIDVPWSLMEEMWSYTLH------EREVRKAAGNG---------------------- CONSENSUS/80% p.Rpl.Vs.cLhphhhsYlh........hch.phtsph............lhlp...... CONSENSUS/65% psRsI.Vss-LhphhhsYlt........hchschtssa............lFlp...... CONSENSUS/50% cPRoIcVusDLhchatDYlt.......chEpc-l-oca............VFVN...... 148807318 -----------RA----------------------------TALVLTREGRQYTKDSIVD CONSENSUS/80% ...........................................lhhtphhtshp.ssh.s CONSENSUS/65% ...........................................lhtsphspPhp.ssl.s CONSENSUS/50% ...........................................LaGsscGpPlchsoVps 148807318 VMKAYERKC---G---FYVRAHMLRHTYGTYTLLALRKS-----------------RDFK CONSENSUS/80% hhpphp++s...G...hphsPHhhRHohushhh.........................ht CONSENSUS/65% hhp+hp++s...G...hcloPHhhRHoaATthL.........................hs CONSENSUS/50% lFcRLc+KT...G...IcVoPHhLRHTaATcLL.........................hu 148807318 GEPLLYVRDRMGHSDVQTTMVYL-HLINQLEAQSVLAHEDEIDMMFMAVSTPSI CONSENSUS/80% G....hlpphhGHtplpTTh.hh.altsc..hpt.h-hts..hth.hh...... CONSENSUS/65% Ghs.phlpchhGHuclpTThthhsHlss-.thcpsh-tts.hhth.hhp..... CONSENSUS/50% GsPl-hVp+RLGHucIQTTlshYsHlu--.-lRcslEcsstpsuhclspts.t.
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |