379731.PST_0913_from_146_to_22GVPIR---LNPIGHK----LLAILMQR---SPA----VVRREALEE----ALWGDN---- CONSENSUS/80% sp.l.....s.tEht....lL.hhhtp...st.....hhp.ptlhp.....has...... CONSENSUS/65% sp.lt...hospEap....lLthLhpp...sp.....lhstppLhp....tlWs...... CONSENSUS/50% Gcslp...LTspEac....LLphLhpp..sGc.....lso+-pLl-....plWuht.... 379731.PST_0913_from_146_to_22--------------VPDSDSLRSHIHQLRQALDK----------------------PFER CONSENSUS/80% .................tp.lpshltpLRpplt........................... CONSENSUS/65% .................ppslcstlppLRcKlp........................... CONSENSUS/50% ................sspsl-VaIs+LR+KLcp.......................... 379731.PST_0913_from_146_to_22PLLHTVHGV--GFRL CONSENSUS/80% ..l.ohhuh..GYhh CONSENSUS/65% .hIpTlpGh..GYph CONSENSUS/50% .hIcTVRGl..GY+l
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |