235909.GK1332_from_353_to_527KSLATRSSSGEVINAIAKAVP-----QLFGGS-ADLASSNKTL-------IKGG---GNF CONSENSUS/80% t.hshtts.t.shtthht..........lhh..tsht....................t.h CONSENSUS/65% tthshppu.spslsphhpt........plhshstDlstus.................tsa CONSENSUS/50% sshshppAhspuLsslspp.......tplsshssDlutushhp.............tusa 235909.GK1332_from_353_to_527LPDS------------------YEG----------------RNIWFGVREFAMGAALNGM CONSENSUS/80% ..p.......................................hhphsltE.thhsht.Gh CONSENSUS/65% .sp.......................................hhcsslsEtshsuhssGh CONSENSUS/50% sspt.....................................phh-sGIuEpuhluhAsGh 235909.GK1332_from_353_to_527ALHG-----GLKVFGGTFFVFSD----------YLRPAIRLAALMG-------------- CONSENSUS/80% uh.u........sh.thh..hh............sh..hh.th..t.............. CONSENSUS/65% AhtG......hhPhsshahsFhph..........uhsthp.ssthp.............. CONSENSUS/50% AhpG......hhPhsutassFhst.........hApsplcpuushs.............. 235909.GK1332_from_353_to_527------------------LPVIYVLTHDS-IAVGED------------------------ CONSENSUS/80% ....................h.hhhhh...hhhst......................... CONSENSUS/65% ....................hshlhthss.shhGts........................ CONSENSUS/50% ....................lshlhstsstGslGp-........................ 235909.GK1332_from_353_to_527--------GPTHEPIEHLASLRAMPNLS-----------------------------VIR CONSENSUS/80% ........u..aps....shhtthss...............................lhh CONSENSUS/65% ........GspHpuhp..uhhttlPsht.............................Vht CONSENSUS/50% ........GsoHputcshuhhpslPulp.............................Vls 235909.GK1332_from_353_to_527PADANETAAAWRLALEST----------------DKPTALVLTRQD-VPT CONSENSUS/80% Pss..phhthh..tht....................s.hlhh..tt.h.. CONSENSUS/65% Pssst-htthhttulp...................tP.slhhspps.h.. CONSENSUS/50% PuDss-stshlcpAlc...................sPsllhhs+pshhs.
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |