Q3SHW0_THIDA/11-285AGVAAEYYAQ.TD....................D.YYRD..............RGHAPTA CONSENSUS/80% .ttuhtYhtt..t....................s.YY.t...............t...s. CONSENSUS/65% sspuhpYhppths....................s.YYsp..............tsp..up CONSENSUS/50% AusutsYascphstst.................c.YYsp..............pupssGc Q3SHW0_THIDA/11-285.WQGK..GAEA............LG.................LR.G.E.........VT. CONSENSUS/80% .WhGp..uhtt............hs.................lt.G...........ls. CONSENSUS/65% .WhGp..Gutt............LG.................lp.G.t.........Vs. CONSENSUS/50% .WhGc..GAsp............LG.................Ls.G.p.........Vs. Q3SHW0_THIDA/11-285PAQAEAIL.NGILP.............................................. CONSENSUS/80% ttthttlh.tGh.s.............................................. CONSENSUS/65% ppphptLh.pGppP.............................................. CONSENSUS/50% ccpapsLh.pGpcPt............................................. Q3SHW0_THIDA/11-285NGERVGGG.................................................... CONSENSUS/80% ssttlst..................................................... CONSENSUS/65% suppLup..................................................... CONSENSUS/50% sGppLG+th..h................................................ Q3SHW0_THIDA/11-285............................................................ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ Q3SHW0_THIDA/11-285.......................................DHRPGWDATFSAP.KSVSVA. CONSENSUS/80% .......................................pthsuhDhshs.P.KSlShh. CONSENSUS/65% .......................................pthsGaDlTFSsP.KSVSlh. CONSENSUS/50% .......................................pcpAGaDlTFSuP.KSVSll. Q3SHW0_THIDA/11-285.AY.VR.G..DDR...LIAAH.............DRAVNAAIQ.YLEREVAAT.RIR... CONSENSUS/80% .hh.ls.s..sph...l.tAa.............ptAlttslt..lEpths.s.Rht... CONSENSUS/65% .hh.lu.s..ccp...lhpAH.............ctAVppsls.hlEpphshs.Rhs... CONSENSUS/50% .ss.lu.s..D-c...ltcAH.............cpAVssuLs.alEccsutT.RlG... Q3SHW0_THIDA/11-285....EEGEV.RTEATG.NLVAATYRHDVSR..............E......GE....PD. CONSENSUS/80% ......st.....tst.thhhuhapH.suR..............s.......D....Pp. CONSENSUS/65% .....puth.tthpos.sllsAtFpHtsSR..............s......sD....Pp. CONSENSUS/50% .....sGss.sphcTu.sLlAApFcHcoSR..............A......sD....Pp. Q3SHW0_THIDA/11-285........LHTHSVIANITQ..SAD..........G....Q................... CONSENSUS/80% ........lHsHshl.Nhs.....s..........G....p................... CONSENSUS/65% ........LHTHsllhNhsp...tD..........G....p................... CONSENSUS/50% ........LHTHsllsNtTp..tpD..........G....+................... Q3SHW0_THIDA/11-285.....................WRS..LES.............RP.LYRLQTDA..GAVYR CONSENSUS/80% .....................htu..lps.............p..hhttthhh..sthap CONSENSUS/65% .....................W+u..Lps.............ct.laptthhh..uthYp CONSENSUS/50% .....................WRu..Lcu.............cs.lacsstss..uplYp Q3SHW0_THIDA/11-285AALARECE.RLGYAT..ERTRAG......EHPSFELRQVSQ.AE...............R CONSENSUS/80% s.ltttlt.thGhph..............pts.hEltuhst.th...............h CONSENSUS/65% stLspplp.pLGhph..t.h.........cpsshEItGlsp.ch...............l CONSENSUS/50% ucLApcLp.cLGYcl..ctt..t......+cssaEIsGlsc.-l...............l Q3SHW0_THIDA/11-285DMWSTRS.......RQVEAELAK.....MGLSRETATAEQKQA.....AALATRQAK..G CONSENSUS/80% ttaSpRp.......ttltt.htp............ts..t..h.....sthtoR.tK... CONSENSUS/65% ptFSpRp.......ppIptthtc.........tstssstttph.....AshpTRtsK..p CONSENSUS/50% csFSsRs.......ppIcsphcc......ttppGpssssspph.....AsLcTRssK..p Q3SHW0_THIDA/11-285NI...GRDNL..LSNWREQSRQA CONSENSUS/80% .h...shtth..httWttphtt. CONSENSUS/65% .h...shspl..ptpWppputth CONSENSUS/50% sp...ohu-L..pspW+pcAspl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |