DMD401_1-640 LQLDTVLGEGEFGQVLKGFATEIAG---------LPGITTVAVKMLKKGSNSV------- CONSENSUS/80% l.h.p.lGpGtFG.Vh.u.h..................h.VAlKhhpttt.......... CONSENSUS/65% lphtchLGpGtFGpVhpGhhpt...............thpVAlKhl+psst......... CONSENSUS/50% lslscpLGcGsFGcVacGphpst.............tphpVAVKsLKsssst........ DMD401_1-640 -----EYMALLSEFQLLQEV---------SHPNVIKLLGACTSS---------EAPLLII CONSENSUS/80% .....t.tthhpEhphhtph. .pH.pllphhGhsh...........t.hhhlh CONSENSUS/65% .....phpphhpEhplMppl. .pH.NllpLhGlshpt.........pshhllh CONSENSUS/50% .....ppp-FhcEAclMppL. .cHsNlV+LlGlCsps.........pPlhllh DMD401_1-640 EYARY--GSLRSYLRLSRKIE---------------CAGVDFADGVEPVNVKMVLTFAWQ CONSENSUS/80% Ehh... GsL.paLpttt..............................ls..phhthshp CONSENSUS/65% Ehhpt. GsLhpaL+ppptt............................lshtpllphuhQ CONSENSUS/50% Easst. GsLpsaL+cscsp............................lshscLlsaAhQ DMD401_1-640 ICKGMAYLSEL---------------KLVHRDLAARNVLLADGK---------ICKISDF CONSENSUS/80% lupGMtYLtph...............thlHRDLAsRNhLlspt...........hKluDF CONSENSUS/65% lApGMpYLppp...............phlHRDLAARNsLlspst.........hlKIuDF CONSENSUS/50% IApGMcYLcs+...............phlHRDLAARNlLlscsp.........tlKIuDF DMD401_1-640 GLTRDVYEDD---------AYLKRS---RDR--VPVKWMAPESL------ADHVYTS-KS CONSENSUS/80% GLu+.h.t.... .......hh.......tc..hPl+WhusEsh .. ....thao. to CONSENSUS/65% GLuRthhpt... ......phhph....ts+..lPl+WhAPEsl .. ..ppthaop pS CONSENSUS/50% GLoRsltss... ......cYYps....su+..lPl+WhAPEul .. ..ppspFoo KS DMD401_1-640 DVWSFGV-LCWELITLGASPYPG-------IAPQNLWSLLKTGYRMDRPEN--------- CONSENSUS/80% DVWuaGl.hhaElhohGt.Pa.t.......h.s.phhthltps.hh..s......... CONSENSUS/65% DVWSFGV.hlWElhohGtpPYss.......hsspclhphlppGh+h.pPtp....... CONSENSUS/50% DVWSFGV.lLWElaohGppPYss.......hssp-lhptlcpGtRlspPps....... DMD401_1-640 -------------------------------CSEAVYS-IVRTCWADEPNGRPSFKFL-- CONSENSUS/80% .....................ss.thht.lh.tCWt.pstpRPsFttl. CONSENSUS/65% .....................CssplYp.lMtpCWptpPppRPsFppl. CONSENSUS/50% .....................CPsclYs.lMppCWppcPccRPoFspl. DMD401_1-640 ---ASEFEKLL CONSENSUS/80% ....hp.h CONSENSUS/65% ....hphl CONSENSUS/50% ....tcpL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |