AF132938/1-146 QFTAEFSSRYG-------DCHPVFFIGSLEAAFQEAFYVKAR-DRKLLAIYLHHDESV-- CONSENSUS/80% ph.t.at..h.............hhptsh.tAhptut........p.hhlhlp..t.... CONSENSUS/65% phsp.apsths...........hhhpGohppAhppupp.......+.hhlalpttppt.. CONSENSUS/50% chscpacssau..........slFapGoacsAlpcApp.....ph+hLhlYlppscss.. AF132938/1-146 LTNVFCS--QMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIR- CONSENSUS/80% .s..hsp phhtsc.l.thlpp.phlha.h..sppps.th...hh.............. CONSENSUS/65% tspshsp sshss-slhphlpp.palhathshspsEGhch.p.hp.............. CONSENSUS/50% sopsFsR slLssEuVpshI+c.pFlhWssslcosEGp+hsppa+.............. AF132938/1-146 --TQKTDQFPLFLIIMGKR---SSNEVLNVIQG-NTTVDELMMRLM CONSENSUS/80% .....hpphP.hhhl...t...p.h.h.t.hps.....pthh..h. CONSENSUS/65% .....hpphPhhsllh.ts...phh.hhthlpu.st..-plhphLp CONSENSUS/50% .....scsaPhlulVhssss.tcphpllsplcG.spss--lhppLp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |