Consensus terms for the UBQ domain

O14562-379       --VDLKIIWN--------KTKHDVKFPLDSTGSELKQKIH---SITGL---PPAM--QKV
CONSENSUS/80%    htlhlp..t........p.h.hplt.pp..sl.tlKttlt...t..th.....t....pl
CONSENSUS/65%    hplhl+s.p........pphthplpssp..oltplKpplt...pttsh...sspp..p+L
CONSENSUS/50%    lplpVKshst.......cshslclsssc..TVppLKp+lp...sppul...Pssp..Q+L


O14562-379       MYKGL-----------------------------VPED---KTLREIKVTSGA------K
CONSENSUS/80%    hhtut......               ........Lpsp. ..shtththt.tt......h
CONSENSUS/65%    hapGp......               ........LpDp. .pslsphtlpsts......h
CONSENSUS/50%    lasG+h.....               ........LcDc. .poLu-aslpsss......s


O14562-379       IMVVGS
CONSENSUS/80%    l.hhhp
CONSENSUS/65%    lhlhhp
CONSENSUS/50%    lpLslc

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T