O14562-379 --VDLKIIWN--------KTKHDVKFPLDSTGSELKQKIH---SITGL---PPAM--QKV CONSENSUS/80% htlhlp..t........p.h.hplt.pp..sl.tlKttlt...t..th.....t....pl CONSENSUS/65% hplhl+s.p........pphthplpssp..oltplKpplt...pttsh...sspp..p+L CONSENSUS/50% lplpVKshst.......cshslclsssc..TVppLKp+lp...sppul...Pssp..Q+L O14562-379 MYKGL-----------------------------VPED---KTLREIKVTSGA------K CONSENSUS/80% hhtut...... ........Lpsp. ..shtththt.tt......h CONSENSUS/65% hapGp...... ........LpDp. .pslsphtlpsts......h CONSENSUS/50% lasG+h..... ........LcDc. .poLu-aslpsss......s O14562-379 IMVVGS CONSENSUS/80% l.hhhp CONSENSUS/65% lhlhhp CONSENSUS/50% lpLslc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |