339860.Msp_1462_from_274_to_361AILGITTD--DTLKTQEDNASLILIDDFVQRDV---EVWVHDDKVS----------EDII CONSENSUS/80% hlhGhsaK...sssDhRpu.sh.lhp.L.t.sh...pl.haDP.s...........tt.h CONSENSUS/65% ulhGluFK..sssDDhRcosulslhptLhptGs...pVtsaDPhs........pttpphh CONSENSUS/50% ulLGLuFK..ssoDDhRESPulsllcpLtcpGA...cVplYDPhs.......hcstcchh 339860.Msp_1462_from_274_to_361EAHG-------------------AKKISLDEIYD-ADCIIVMIDTPEYRN----INPS-- CONSENSUS/80% ..........................t...thhtt.hcslllhstapth........... CONSENSUS/65% .....................th.htsh..pshps.sDslllhscappatt....s.t.. CONSENSUS/50% ....................lsh.ssssp.-ulcs.ADAlllsT-ac-F+p...hshp.. 339860.Msp_1462_from_274_to_361-KIEKI--------------------IITA CONSENSUS/80% ..h.thht...........hlhDs+shht. CONSENSUS/65% .tltphhpt..........hlhDsRslhs. CONSENSUS/50% .clpshhcp..........lllDsRNlhcs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |