RAD3A_ARATH/1088-1194LPGFLQNHFVGLLNSIDRKMLHAD----DIFLQKQALKRIKLLIE-MMGHYLSTYVPK-- CONSENSUS/80% htphlptphLulht.hsp.h.p.p....sh..+hpsl.ult.hhp.h.tt.ltshhsp.. CONSENSUS/65% hspaLpsphLGlhshhsptlpc.p.hppsh.-Ktpslpulthllc.hssttlsoshsQ.. CONSENSUS/50% lscaLpsclLGllspFusslp-sc.GcpslhEK+psLpuIppLI+.ssscpIoouhPQ.. RAD3A_ARATH/1088-1194--LMVLLMHAIEKDA---LQSEGLLVLHFFTRKLADVSPSS--IKYVISQIFAALIPF-- CONSENSUS/80% ..l.ssLpsslt..p...hp..shpsW.hhlp.lt....pp..ltsllsthhshlh.h.. CONSENSUS/65% ..lhssLpouLph.c...lp..shcsWthhlppLpp...pc..lssllsphhshll.h.. CONSENSUS/50% ..IhssLpouLchcE...LcptulcsWplLl+sLsc...--..lusllsplluhllst.. RAD3A_ARATH/1088-1194--LEK CONSENSUS/80% ..h.t CONSENSUS/65% ..hsp CONSENSUS/50% ..asp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |