273119.UU439_from_10_to_75IIKHPLILP-----DGKHYHLHKILTSKDELRKGEVT----LVAENGK-EYTVDLSAFVD CONSENSUS/80% hh....tht..........h..tl.Ls.tth.ppchp....h..ppGt.phhl.L.cs.. CONSENSUS/65% hhs.hptht.......tstthtplhLsh-pRp+pRh+....hpsssGp.-lsl.Ls+st. CONSENSUS/50% hlsptpcls......ssstsscplsLsa-pRp+sRhR....hsocsGc.ElulpLsRGs. 273119.UU439_from_10_to_75-LLVDGDCIFDD-NHSLV CONSENSUS/80% ..LttG-hL..p.ptthl CONSENSUS/65% .hLpsGDhLhsc.ssphl CONSENSUS/50% .sLccGDlLts-.-Gsll
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |