Consensus terms for the VIT domain 

BAB17302/29-158  LLGKRSLPEGAVNGIEIYSTKINCKVTSRFAHNVVTTRAVNRA-DTAKEVSFDVELPKTA
CONSENSUS/80%    ..t.tt..ps.hs.l.lhShplpsplsSRhApsllppphVNpu.t..ppssFphplPKtA
CONSENSUS/65%    h.scpth.pstsssl.lhSh+lps+loSRhApslVTopsVNcu.sshpEssFplElPKsA
CONSENSUS/50%    L.ucpstscusssGVslYSlKVsu+VTSRFAHsVVTS+VVN+A.ssscEVsFDVElPKsA


BAB17302/29-158  FITNFTLTIDGVTYPGHVKEKEVAKKQYEK-AVSQGKTAGLVKASGRKLEKFTVSV-NVA
CONSENSUS/80%    FIosFshhlsGhsa.uplK-K..Apt.Ypp.AhspGcsAuLV+ssuhphEpFphpV.sls
CONSENSUS/65%    FIosFuhslDGhsasGpIKEKthApppYpp.AsupG+sAGLV+uouRphEpFplpV.sVs
CONSENSUS/50%    FIoNFohTIDGsTasGsIKEKssApcQYpc.AlupG+oAGLV+uoGRshEpFTVSV.NVu


BAB17302/29-158  AGSKVTFELTYEE
CONSENSUS/80%    stuKlpFpLhYpE
CONSENSUS/65%    PsuKVsFcLsYpE
CONSENSUS/50%    PGSKVTFELTYEE

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T