291331.XOO3549_from_73_to_186LSRYKPEVNYDMTQQ-------PPAPIMDSGL----------------ATKAHDWLKGWI CONSENSUS/80% ..ttt.................h.t.hh................................ CONSENSUS/65% hpptp.................hps.hlt.............................h. CONSENSUS/50% hs-psh..hh.th.t.......lpssllp...............h.....p.h..hhtsh 291331.XOO3549_from_73_to_186DKYWDEPGKDRPPFRPRAGLIR--RPDVVTVIDP-TRPP--------------TQDNLED CONSENSUS/80% ...hhthhh.thht...t...G..hPDhhhh..................... ...t.hh CONSENSUS/65% sstthtshht+hhp..tthp.G..hPDllhhhs................... ..tsphh CONSENSUS/50% ssptlsulst+hspchpuscsG..lPDLllhhst.................. ..pscht 291331.XOO3549_from_73_to_186VIEIKFPGD-----EMSDAQREDYRRIAGKD-----PILLES--SE CONSENSUS/80% hlElKh.sp.....chp..Qh.hhp.htt.s.....h.s.lh.s.. CONSENSUS/65% hlElKuPs-.....+lpppQhthhphltptG.....htstVscsht CONSENSUS/50% hVEVKuPGD.....+LpcpQppalcpLpcpG.....hcVtVscsst
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |