P70429/1-109 MSEQSICQARASVMVYDDTSKK---WVPIKPGQQGFSRINIYHNT------ASSTFRVVG CONSENSUS/80% .tppshh.shu.V.hh.s..tt...W...t.s...h.tl.h..st......pt.hh+lhs CONSENSUS/65% huppslhhstAsV.lhsssspp...Wh.sstu...ssslsh.pss......psphaRlhs CONSENSUS/50% hucpslstusAlVpLYcAssc+...WsssusGs..suslshcpsu......susaaRIlu P70429/1-109 VKLQDQ-QVVINYSIVKGLKYNQAT-PTFHQW-------RDARQVYGLNFASKEEATTFS CONSENSUS/80% hp.p...pllhp.tl..shhhtpsp..hFppa.........spphhGLsF.stt-AppFt CONSENSUS/65% hp.p...pllhspplhpshcYppsp.spFHpat.......tspphhGLNFsspp-AppFt CONSENSUS/50% lcsss..cllW-pslhpsh+YsQso.ssFHpWt......ps-cslhGLNFuSccEAppFc P70429/1-109 NAMLFAL CONSENSUS/80% pth..t. CONSENSUS/65% cthhcth CONSENSUS/50% +uVpcsh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |