Consensus terms for the WIF domain 

gi|2143518|pir|  SVSLYLSEDEVRRLLGLDAELYYVRNDLISHYALSF------NLLVPSETNFLHFTWHAK
CONSENSUS/80%    plslals.cEshRLlGlpAElhYVcpGtlssYuhsF......hh.VPuNlp.lsFTWpuh
CONSENSUS/65%    plslals.cEshRLlGlpAElhYVcpGtlssYuhsF......hh.VPuNlp.lsFTWpuh
CONSENSUS/50%    sLNlFLstcEVpRLlGVcAELYYVREGpIusYALsF......tlsVPANIcsloFTWQAl


gi|2143518|pir|  S---KVEYKLGFQVDNFVAMGMPQVNISAQGEVPRTLSVFRVELSCTGKVD--SEVMILM
CONSENSUS/80%    u....l.YplsltosDptlhs.PhlNlsh.GpVPpphpsaplthpCsGpps..uphtVsl
CONSENSUS/65%    u....l.YplsltosDptlhs.PhlNlsh.GpVPpphpsaplthpCsGpps..uphtVsl
CONSENSUS/50%    ut.chl.YplslpSsDpsVLscPtVNIStpG-VPcolQsasVuL+CoG++s..AEVsVol


gi|2143518|pir|  QLNLTVN-SSKNFTVLNFKRRKMCYK
CONSENSUS/80%    .lphhhs.sspp.T.l.h+pcKhChp
CONSENSUS/65%    .lphhhs.sspp.T.l.h+pcKhChp
CONSENSUS/50%    plplsls.uopNsTsLsF+R+KIChp

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T