D1035490/1-93 RAKYIGCYLDDT-QSRALRGVSFFDYKK------MTIFRC-QDNCA-ERGYLYGGLEFGA CONSENSUS/80% thpahuCh.ts..pttshsh.s.h.h.........o.thC.ps.C....s.shsuL..tt CONSENSUS/65% shsYhuCasss..pstslstts.hsh........hosptC.ps.Cs.ttuhshuuLt.us CONSENSUS/50% stsYlGCaocs..susuLutpssashhp......holutC.sstCs.ptGaslAALptGs D1035490/1-93 ECYCGHKIQATNVS----EAECDMECKG---ERGSVCG-GANRLSVYRLQ CONSENSUS/80% tCaCuss.st.t......putCs..Ctu......phCG.usshh.hh..t CONSENSUS/65% pCaCGsshssss......sutCstpCsG....shpsCG.GsshhslYhhs CONSENSUS/50% -CYCGsshsusss....ssusCsssCsG...tssEsCG.GssthsVYhss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |