Q59VW6_CANAL/431-502LSCVVSEDA---TFDE-EVALRELC-FK--VDCEDINANGR-SGKYGRYSDCNPTV---- CONSENSUS/80% .hClspsss...s.ttlttthsasCu....h-Csslt.sss..........C.t.s.... CONSENSUS/65% tWCVspsss...spspLpsslsaACu....sDCssIpssus..........Chp.s.... CONSENSUS/50% pWCVAcsss...ssspLQsslDaACGpu..uDCouIpsGGs..........CasPs...s Q59VW6_CANAL/431-502---RTSYALNKYYEQCGKKQEI---CDFQG------------------------------ CONSENSUS/80% ...phoashNtYapttttttts...CsFtG.u.hsttsso.t................C. CONSENSUS/65% hhs+sSaAhNsYYQppspsssu...CsFsGsAhlsspsPS.ss...............C. CONSENSUS/50% lhuHASYAFNuYYQppupssuu...CDFuGsAslosscPStus...............Cp Q59VW6_CANAL/431-502- CONSENSUS/80% . CONSENSUS/65% h CONSENSUS/50% a
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |