RA27_YEAST/1-1 MGIKGLNAIISEHVPSAIRKSDIKSFFG--RKVAIDASMSLYQFLIAVRQQDGGQLTNEA CONSENSUS/80% MGlpsLh.hlt..t....p..thcth.s..cplAlDs.hhlaphhhsht.t.h..h.s.. CONSENSUS/65% MGlpGLhplltphs....cplplcshpG..+plAlDushhLaphlhusppp.spsh.sp. CONSENSUS/50% MGIpGLhsllscsu....+plclEshpG..K+lAIDuuhaLYQFLpulcpppusslpssp RA27_YEAST/1-1 GETTS----------------------------------HLMGMFYRTLRMIDNGIKPCY CONSENSUS/80% .......................................al.hhhhch.hhh..tlpPlh CONSENSUS/65% .......................................aL.hhhhRhtpLlphsI+Pla CONSENSUS/50% .......................................HLpshFpRsp+LlchsI+Pla RA27_YEAST/1-1 VFDGKPP-------DLKSHELTKRSSRRVET CONSENSUS/80% VFDGts.........hKptp.tpR.tt+tpt CONSENSUS/65% VFDGpss........hKpppht+Rpp+Rtcs CONSENSUS/50% VFDGcsP.......sLKppsls+Rpc+Rpcu
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |