291331.XOO4499_from_25_to_185VHFIDPA--------QSRFGFEIKTRFG-MKIEGFFPRFRGEVVELPDKRKQ--VRFWLD CONSENSUS/80% tatlss.........p.th.h.hpthh....h.uphtthpuph.hp.........ththt CONSENSUS/65% saplDs........s+sphththpphh.hsphpGpFsphsGplshc.tt.t...sphphs CONSENSUS/50% saslDs........uHoslsFplpHhs.hoslpGpFschsGslshDsss.st..uplsls 291331.XOO4499_from_25_to_185AT-QV--------EIPGKDR-------------YTSWMR-------GEDFFDVAHY-PVV CONSENSUS/80% h.h.s........hts.................hstpht.......t.phhsstph.sph CONSENSUS/65% lsssS........lsosptt.............hct+lp.......ss-aasstpa.Pph CONSENSUS/50% lsssS........lsTsssp.............cDsHL+.......usDFFcssca.Pph 291331.XOO4499_from_25_to_185EFESLPYTDDVIK----------GGGDITGNLTIRGITHI-ETLHVLPAECTR------- CONSENSUS/80% th.sp......................ltGpLolpGhop..l.hthth............ CONSENSUS/65% sFtusthh.tsst...........thplsGsLTl+GhT+s.lslssph............ CONSENSUS/50% sFpSophttsusp...........phplsGcLTl+GlT+P.Vslclshsttt....h... 291331.XOO4499_from_25_to_185---------------------------------------------------TGYDCD--- CONSENSUS/80% ............................................................ CONSENSUS/65% ......................................................hhs... CONSENSUS/50% ....................................................ttthG... 291331.XOO4499_from_25_to_185---------------------VISRGTVLRGRYGMNAWQMALG--------------DGV CONSENSUS/80% .....................hpsth.lphtpasht.......................l CONSENSUS/65% .....................hpussplpRp-FGlsh...h.st.............ppV CONSENSUS/50% .....................hsussslcRsDFGlshshshtsshhhht........-cV 291331.XOO4499_from_25_to_185TFILRGRLQ-- CONSENSUS/80% tlphphth. CONSENSUS/65% plplplphh CONSENSUS/50% slslslcut
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |