YAK1_SCHPO/687- PSVLAVSNGKGESSDAIICVFVDDV-GEPTDSLKLADL-------------RDLANQAMF CONSENSUS/80% hhhluhD.G....ppththAhss...sthhtsh.hh.h............tp.t.shttl CONSENSUS/65% tthLGlD.G....ppthtlAlscth.sthspshtsh.t............tphptshppl CONSENSUS/50% pplLGlDsG....c+slGlAlsDss.Gplssslsllsp............sptstshspL YAK1_SCHPO/687- AEFVEK--VKPDVIGVSG--------MSVSAHKIR---QHVQDSLTS---------HEPV CONSENSUS/80% .phhtp..hpsphlslG.........sss.t.tst...phhtphltt...........th CONSENSUS/65% tpllpc..apsphlslG.........sGotsppsp...chhschlpp.........hhsl CONSENSUS/50% pcLlcc..aplctlllGhPhth....sGTsuccoc...cthuchL+c.........phsl YAK1_SCHPO/687- DLIMVNDEVARLYQ CONSENSUS/80% .hhhhsEthsoh.u CONSENSUS/65% .hhhhsEphsolhu CONSENSUS/50% slhllDERlooVtA
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |