2648041/1-241 ECGPT-SITVNFNTRNPFEG-HVYVKGLFD-----QAGCRS----DEHGRQVAGIELPFD CONSENSUS/80% .Ctts..h.l.ltpp.......h.htsh.........tCt.........tt.h.hph.hp CONSENSUS/65% pCtps.phtlplppshhhss..l.hpshth.....stsCps.....t.spshhhhphshs CONSENSUS/50% pCssc.phsVslspcpstsut.lplsslpl.....cssCps....sssssshltaplPls 2648041/1-241 --SCNVARTD--AEPKGVFVSTTVVIS------------------------------FHP CONSENSUS/80% ..tCss.hp....pspthhhps.lhht................................s CONSENSUS/65% ..tCGsthp...hssstlhYpsplhhs..............................hts CONSENSUS/50% ..sCGoppp...hsscsllYpNslsss..............................hss 2648041/1-241 QFVTKVDR-AYRVQCFYMEADKTVS------AQLEVSEIT--------TQFQTQV---VP CONSENSUS/80% ..lh+.s.h.h.hpCha.ttt.h..........h.h.......................t CONSENSUS/65% shIo+ssph.hphpChYttspph.........phtlsshs........s..hp.s....s CONSENSUS/50% shITRsscsplslpCtYscsspss.......spsslsshs........ssthssst..pG 2648041/1-241 MPVCKYEILEG-----------------------------------AALGQPIQFAT--- CONSENSUS/80% ...hphplh............ .. ................t..t..ht.s.... CONSENSUS/65% .hshphplhp........... .. ...............tstasp.hp.s.... CONSENSUS/50% hhssshplhs........... .. ...............sssausshpsup... 2648041/1-241 -----------------------------IAQQVYTSGTCDSET---------------- CONSENSUS/80% . .....ltp.lhhthph....... CONSENSUS/65% . .....lsp.lahphps.t..... CONSENSUS/50% . ..hh.LG-slalpsplpptt... 2648041/1-241 -------IDTFCAVVHSCVVDDGN-----------------------GDTVQILNEGSCA CONSENSUS/80% ....ps.hthhlppChssss.. ........ph.llp.pGC. CONSENSUS/65% ....ssshtlhlcsChsosss. .....ttspa.lls.sGCs CONSENSUS/50% ....csslslhlcsCaATsus. ..ss.ssscaslIc.sGCs 2648041/1-241 LD--KFLLNNLEYPT-----------------DLTAGQEAHVYKYAD-------RSQLFY CONSENSUS/80% hs..........h.t...... .......htth.hphFpFhs.......ts.lah CONSENSUS/65% hD....h.s.h.htp...... .....sphtphphpsFpFss.......ps.lah CONSENSUS/50% hD...hhsssssass...... ....ssppuRFsscsF+Fss.......pspVYl 2648041/1-241 QCQISITIKEPHS-----ECA----RPKCAEP CONSENSUS/80% pCph.ls...t.......tC.......tCs.. CONSENSUS/65% pCplplC.ttss......pCp......sCsht CONSENSUS/50% pCplplCsssss......sCp.....ssCsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |