ZIPA_XYLFA/95-225FDKIILLFVAAKAEHTLRGEDIVVAAEKTGMIFGYMNV-FHRLVEGYPEHGPI-FSMASI CONSENSUS/80% .t.hlhl.lhs..tt.htG..lhpsh.t.GhhhG-.sh.aHRh.p.sst.t.hhFSlssh CONSENSUS/65% spshlslpVhuttspthsGscLhpslpphGhhaG-hsl.FHR+tshsss.u.lLFSlANh CONSENSUS/50% s-slIsLaVlAppspsasGscLlpulppsGhpFGEhsI.FHRHsshuGs.GPlLFSlANh ZIPA_XYLFA/95-225-------LK--PGSFDMANIREMQIPAISFFLTLPAPM-TALDAWEKMLPTVQRMAELL- CONSENSUS/80% .p..susF..tthtphps.Glshhh.lPp.s.ps..sac.hhtsst.hsptl. CONSENSUS/65% sp..PGsFs.sshpsFsT.GlshFhplPp.s.sshpsFchMlpsApplApsl. CONSENSUS/50% sp..PGoFsssshcsFoTsGlohFMsLPssu.sutpsFchMLpsApplA--L. ZIPA_XYLFA/95-225DGVVLDESRNAL--GRQRIAHIRDEL CONSENSUS/80% su.lls-ppt.h s.pthtthhthl CONSENSUS/65% sG.VlD-pRp.h o.pplpph+p+l CONSENSUS/50% sGpVLD-pRchl TspplccYRs+l
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |