Consensus terms for the ZipA_C domain

ZIPA_XYLFA/95-225FDKIILLFVAAKAEHTLRGEDIVVAAEKTGMIFGYMNV-FHRLVEGYPEHGPI-FSMASI
CONSENSUS/80%    .t.hlhl.lhs..tt.htG..lhpsh.t.GhhhG-.sh.aHRh.p.sst.t.hhFSlssh
CONSENSUS/65%    spshlslpVhuttspthsGscLhpslpphGhhaG-hsl.FHR+tshsss.u.lLFSlANh
CONSENSUS/50%    s-slIsLaVlAppspsasGscLlpulppsGhpFGEhsI.FHRHsshuGs.GPlLFSlANh


ZIPA_XYLFA/95-225-------LK--PGSFDMANIREMQIPAISFFLTLPAPM-TALDAWEKMLPTVQRMAELL-
CONSENSUS/80%           .p..susF..tthtphps.Glshhh.lPp.s.ps..sac.hhtsst.hsptl.
CONSENSUS/65%           sp..PGsFs.sshpsFsT.GlshFhplPp.s.sshpsFchMlpsApplApsl.
CONSENSUS/50%           sp..PGoFsssshcsFoTsGlohFMsLPssu.sutpsFchMLpsApplA--L.


ZIPA_XYLFA/95-225DGVVLDESRNAL--GRQRIAHIRDEL
CONSENSUS/80%    su.lls-ppt.h  s.pthtthhthl
CONSENSUS/65%    sG.VlD-pRp.h  o.pplpph+p+l
CONSENSUS/50%    sGpVLD-pRchl  TspplccYRs+l

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T