CBP1_CAEEL/400- PEKRK-LIQQQLVLLLHAHK--CSQREKENRDFAAKNQPPPHAACTLPHCSTMKEVLTHM CONSENSUS/80% ...hh....c.h.hLlHspp..Cpt.................stCt..tChthctlhpHh CONSENSUS/65% .pphh.pltchl.hLlHApp..Cpp.t...............spCph.tCtth+tll+Hh CONSENSUS/50% tpphp.plp+tLthLlHAp+..Csshc...............usCshssC+shKpLL+Hh CBP1_CAEEL/400- TSCNVGRLCHSDTTQTTKKCSVAHCASSRQIIA----HWKNCSRED-CPVCKPL CONSENSUS/80% .tCp...................tC..s+phht....H.+tCtp.t.C.Vshsh CONSENSUS/65% tsCKht................stCsts+phhp....Hh+pCpsps.C.Vshsh CONSENSUS/50% ssCKss............tCshspCssCKpllshhphHa+pCp-ss.CsVChCh
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |