Q9LMA0 VLRRFNPKWFDLYGDWLEYSVEKEK--AFCLYCYLFR-DQTGNQGGSDSFLSTGFC-SWN CONSENSUS/80% h.+phptshhpphs.Wl.hs.ppst..haChhChha.....s.ttttsthh.pGas.sap CONSENSUS/65% p.RphptsWappas.WLpYsspp-s..sFChhChha.....sttspssthh.pGas.sap CONSENSUS/50% +sRRFp+SWFcpFssWLcYSscKDu..sFChsCYLFh....spsucSssasscGas.sW+ Q9LMA0 KADR-----LDQHV-----GLDVNSFHNNAKR--------KCEDLMRQGQSIKHALHK CONSENSUS/80% h.t......l..H.........hsp.Hp............hC.phh.tpp.h.tth.t CONSENSUS/65% htp......lptHt........ssptHp............hChshhtppp.hhpth.p CONSENSUS/50% lscp.....LspHs.......tlo+sHs.At.........tCh-hhpQcssIt+spcc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |