PHLC2_CLOPE/1-278MKRKIYKLLICATIATSLWAVRTTKVYA-------------------------------- CONSENSUS/80% hp.Khhthh.shhh...h................................. CONSENSUS/65% MKpKhlphhhshhhshhhh.hh.ttshs....................... CONSENSUS/50% MK+KhLKllssllhsshlhsshsppsau....................... PHLC2_CLOPE/1-278-W---DGKADGT-GTHAMIATQGVTILENDLS-----SNEPEVIRNNLEILKQNMHDLQ- CONSENSUS/80% . ..ct..ctt.soH.hlhppuhphLtpc.t ttt.p........hpp..tplt CONSENSUS/65% W ..-thhcss.sTHthIhppAlplLpp-hs tsp.p.ht....hLpc.hcclp CONSENSUS/50% W ..DGKpDGT.GTHuaIssQAlcILsNDls sscschl+....lLccah+cLp PHLC2_CLOPE/1-278LGSTYPDYDK-------NAYD--LYQDHFWDPDTDNNFTKDSKWYLSYSIP-DTAESQIR CONSENSUS/80% .G.h.sDhc. ..hs......HFasPppsps........l.h... tsupppht CONSENSUS/65% .G.hhsDa-. stYs..ha.sHFasPcssps.......YLsh..h psAcppsp CONSENSUS/50% pGoTaADYDs suYD..hFtsHFaDPDTc+N.......YLuu.la coAcsss+ PHLC2_CLOPE/1-278KFSALARYEWKRGNYKQ---ATFY--LGEAMHYFGDADTPYHAAN--VTA---------- CONSENSUS/80% Kaht.uhpthcptphcp Ahah..LG.uhHhhtDhs.PhHssN .hhs CONSENSUS/65% KahshuhppaccGshcp Ahah..LGtuhHYhsDlspPhHusN .hTA CONSENSUS/50% KaasLAcsEa++GNa-c Ahaa..LGpAhHYlGDlssPYHAuN .lTA PHLC2_CLOPE/1-278----VDSPG------HVKFETF-A--------------EDRKDQ---------------- CONSENSUS/80% .ls..... H.taEta.s pphtpp........ CONSENSUS/65% .lsss... HspaEsa.l -phKss........ CONSENSUS/50% .VcSPG.. HsKYEsa.V -c+KDs........ PHLC2_CLOPE/1-278-YKINTT-GSKT--NDAFYSNIL----TNE---DFNSWSKEFARSF--------AKT--- CONSENSUS/80% Yth.tt..............hh. ..psp s.ppa.ht.sh.h........... CONSENSUS/65% Yphsss.st..........phh. ..pss shppWhpp.uhhh........st. CONSENSUS/50% Yplsos.up.o...pth.scsl. ..cs- Nhc-Wh+-NA+ps........ucp PHLC2_CLOPE/1-278-AKDLYYSHANMSCSWDEW-----DYAAKVALANSQKGTSG-YIYRFLHDVSDGKDSS-- CONSENSUS/80% hpp.Y..t.s......pa ....p..st.hltpup.shAG.hl..ahpchtt....... CONSENSUS/65% sKp.Yhptsshppp.pcW ....chsusttlpsuQhssAG.al.hahpcssp....... CONSENSUS/50% AKchYhs+uohpcs.--W ....DtuAucsL+sAQpsTAG.FLYRFhc-Vuct..s...
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |