407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1YNVKFLKGYGHSISVKDSKIILKSNHDPF--SPPEQEEWFVKNMPYEK-IVLSG-KGYVS CONSENSUS/80% hphlhlpGaGhphpVctupLhl+ssh.....ppspp..h.s+phph...lll.u.pG.lo CONSENSUS/65% hphLlLsGaGlslpV-su+Lhl+DGp.st..ccsppa.a.s+ph-h-p.IllhGtsGslS CONSENSUS/50% M+lLLLsGHGIsl+V-suKLhIKDG+tss.pc-PpcYsFtPKclDhDs.IVlhGpoGslS 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1TEALSLLSENNRNVILLDNHGKPVTF--CNGMMDSLTATKYRMAQYDTFRNPEKCEYLRK CONSENSUS/80% h-AlpWl.cpshpl.hLs.sG+.lsh....hh.sp.pssch+htQhpsh.s.pth..lsp CONSENSUS/65% h-Al+WLhcpslplslLcWsG+llos....hhsspssssKh+hAQYpsatspcsplplu+ CONSENSUS/50% lEAIRWLhKHNlslolLDWcGKLLTT....hlPPEsTslKs+hAQYcAFcDccsRlclA+ 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1QIISAKKESQLKLLRLIGS--------------------------------EISELPDSE CONSENSUS/80% phIptKh.tp..hLt.ht.................................plptlhshE CONSENSUS/65% phIcuKhcpohtlLchltph...hp.s.................tphppspslpclhslE CONSENSUS/50% chI-AKa-+SpslLchLppcYP-lchshs............s.htKLppspoIcElhuVE 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1HISAKVYWTEFA------------KFIPEK---YQFHSRNQSHITSSKNNATDIINALLN CONSENSUS/80% uhsAhhYWtths............c.lPtp...athpup..st..tps.tusc.lNshLN CONSENSUS/65% utsAhhYWspau............KslPcc...asFpuRs.sp..spshsAsD.lNshLN CONSENSUS/50% GslAtpYWsEau............KsIP-c...Y-FcuRs.cps.s+spsAuDhINAMLN 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1YGYSVLAGEISKFVCGFGLDPYLGFMHRSH-TGFQPLVYDIIEPFRWLVDYTVYSMANHS CONSENSUS/80% YuYulLtuph.hhlpuhGLDshhGhhHc.t..utpsLsaDL.E.hR.hlDh.Vhphhp.. CONSENSUS/65% YGYulLEuEsh+slsulGLDstlGFLHchp.su+suLsYDL.EPaRalVDhuVhsllp.. CONSENSUS/50% YGYALLEAEspRAINuVGLDPalGFLHEhs.suKsSLAYDLQEPFRalVDhuVlsLlE.. 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1STRQRIKLKEYSFTKDGTVVLEYSLIKRFL CONSENSUS/80% ...thhp.p-FhhTpshtlplp.shh+clh CONSENSUS/65% ..ptthcpKDFlhTcshslRLcsshs++ls CONSENSUS/50% ..cpphcpKDFIcT-sasLRL+PosA+Kll
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |