5850.PKH_130290_from_83_to_157VVKRTELQLIDITED-------GFVSLLN-DN-GETKDDLSLPKDSDGNPDDVAKQIRTL CONSENSUS/80% .lp+pphQllslts.........hhpLhs..p.s..p.-lthPp..........tplpt. CONSENSUS/65% hlpRpchQllsIsss........hlpLMs.ps.utp+pDlclPcs........spclppt CONSENSUS/50% hVcRc-aQLlsIs-D.......GaloLMD.c-.Gps+-Dl+lP-s-h......uc-Icsc 5850.PKH_130290_from_83_to_157F-----DSGKS--VLVSVLSACG-QEKIIAVK CONSENSUS/80% h.....ptstp....lthhpuhG.pcthhth+ CONSENSUS/65% h.....cpGc-....VsllpAhG.ccphhshK CONSENSUS/50% a.....-sGc-..hhVsllsAMG.cEpllssK
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |