IF1A_YEAST/13- YKEE-GQEYA-----QITKML---GNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIIL CONSENSUS/80% h.cc.sp.hu......V.phh...Gsshhpshs.cG.phhscl.uKh+++lWlppGDhll CONSENSUS/65% hh--.sp.hu.....pVh+hl...Gsu+hcshChDGppRLs+I.GKhRK+lWIppGDlll CONSENSUS/50% h+E-.GQpaA.....QVp+ML...GNGRlEVhChDGpcRLs+IPGKhRKKVWI+cGDlVL IF1A_YEAST/13- VSLRDFQ-DDQCD--------VVHKYN-LDEARTLKNQGELP CONSENSUS/80% Vt.h-hp.cp+u-........llh+ht..spsc.Lpp.u.hs CONSENSUS/65% Vt.h-aQ.cpKuD........llh+Ys..scs+hLcp.G.lP CONSENSUS/50% VshhDaQ.D-KAD........Vla+Ys.pDEuRpL+cpGclP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |