IF2B_METTH/10- TKRFEVPKAYSVIQGN-----RTFIQNFREVADALNRDP-----QHLLKFLLRELGTAGN CONSENSUS/80% h.+h.h....hhhtG......+T.h.Nh.-lscthtR.s.....pahhpahhtElGstsp CONSENSUS/65% hhRaphP..pshhEGp....hKTlhhNhh-ls+slpRss.....palhcalhsELGopus CONSENSUS/50% ppRacMPsPplh+EGp....hKTllsNFsDIAKsLsRsP.....cHlhKFLhsELGTsGo IF2B_METTH/10- LEG--GRAILQGKFTHFLINERIEDYVNKFVICHECNRPDTRIIRE--GRISLLKCE--- CONSENSUS/80% h-tt.tphllpGtap.tphtshlctalppaVhC.tCts.-T.l.hp..pphh.hpCt... CONSENSUS/65% lDsp.tchllpGcastpplpslLctaIccYVhChsCpsP-TpLhcc..schhhLcCc... CONSENSUS/50% lDup.sRLllpG+FsscclpslLccYI+cYVhCtsCcSPDTcLpK-..sRlahL+Cc... IF2B_METTH/10- -------------ACGAK CONSENSUS/80% .............sCG.. CONSENSUS/65% .............uCGup CONSENSUS/50% .............ACGup
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |