Consensus terms for the eIF6 domain

IF6_YEAST/3-204  TRTQFENSN-EIGVFSKLTNTYCLVAVG-GSENFYSAFEAELGDAIP-IVHTTIAGTRII
CONSENSUS/80%    .+hph.sss.plGla.hhssthslls.t.hspphhphhpt.Lt..h..llpssIutotll
CONSENSUS/65%    .Rlphpsss.plGVahthTssYsllshs.hspshhsshcp.Ls..ls.llpsoIuGopll
CONSENSUS/50%    pRlsa-uss.-IGVFupLTNuYsLVstG.usEsFauslEucLushlP.VV+TSIuGSRlI


IF6_YEAST/3-204  GRMTAGNRRGLLVPTQTTDQELQHLRNSLPDS-VKIQRVEER---LSALGNVICCNDYVA
CONSENSUS/80%    GthhsGNppGlllsp.shspElp....tL.t..l.h.hl..t....sAlGNhlhsN-hsu
CONSENSUS/65%    GpLssGNppGlLVPptshDpElptl+puLs-p.Vplphl-p+...hoALGNhlhsNDhsA
CONSENSUS/50%    GpLssGN+cGLLVPsssTDpELp+L+NuLP-s.VclpRV-ER...loALGNlIlCND+uA


IF6_YEAST/3-204  LVHPDIDRETEELISDVLGVE-VFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELS
CONSENSUS/80%    lhpsphpppt.chlt-sLtV-.lhctolut..hVGShsshospGshlpspss.p-.t.lt
CONSENSUS/65%    Lspsclsc-spchluDsLsVE.lh+tTlAs.hhVGShssloNpGuLVHPpss.--hccLs
CONSENSUS/50%    LlaP-Ls+-oEElIuDVLGVE.VhRsTIAsphlVGSauVloN+GGLVHPcTSsEEh-ELu


IF6_YEAST/3-204  SLLQVPLV-AGTVNRGSSVVGAGMVVNDYLA
CONSENSUS/80%    plhtV.h..sGThNhGs.hluuuhssNs.ss
CONSENSUS/65%    sLhpVslh.uGTlNhGophluuGhVsNshss
CONSENSUS/50%    sLLpVPll.AGTVN+GSsslGAGlVsNDauA

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T