7165.AGAP004159-PA_from_98_to_279QDRNE--RLFFRLISED-VEKMMPIVYTPTVG-LACQKFGLIYRRP-------------- CONSENSUS/80% .sc.p..hh.hh.htsp...c.hslhYoPsVu.tss.thtt..pt............... CONSENSUS/65% ts+.p..hh.ht.lpsp...c.LslsYTPsVu.psspphupp.cp............... CONSENSUS/50% pGKlE..llsp+slpsp...-DLulsYTPGVA.csCppIucshcc............... 7165.AGAP004159-PA_from_98_to_279---------------RGLFVTINDRGHVFDVLR----------------NWPEPDVRAIV CONSENSUS/80% ................h.hh.ht................................s.lhV CONSENSUS/65% ...............thhahstt................................shlsV CONSENSUS/50% ...............stpYTs+s................................NpVAV 7165.AGAP004159-PA_from_98_to_279VTDGE--RILGLGDLG-ACGMGIPVGKLALY-----TALAGIPPHQC-----LPIVIDVG CONSENSUS/80% losGp..tlLGLGshG.hsuhsl..GKhhLa.....pthuslss........hsl.ls.. CONSENSUS/65% VoDGo..ulLGLGslG.huuhslh.GKhhLa.....pthAGlcs........hPltlDs. CONSENSUS/50% VTDGo..AVLGLGDlGstAGhPVMEGKusLF.....KtFAGIDs........lPIsLDs. 7165.AGAP004159-PA_from_98_to_279TNNKDLLEDPLYIGLRHQRV-QGKEYDEFIDEFMQAVV-KRYGQNTLIQFE--------- CONSENSUS/80% ...........................p..-phlphht.th..s.shlphE......... CONSENSUS/65% ...........................p.s-chlpslp.thhsshusIphE......... CONSENSUS/50% ...........................cslD-alcsV+.pltssFGGINLE......... 7165.AGAP004159-PA_from_98_to_279---------DFGNHNAFRFL----DKYR CONSENSUS/80% .........Dhtsspsh.l.....pchp CONSENSUS/65% .........DhusspsFpl.....c+h+ CONSENSUS/50% .........DIuAPcCFcIE....c+L+
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |