Q54094/41-281 TIARIAETAELRPDL--------PVLEAGPGEGLLTRELADR---ARQVTSYEIDPRLAK CONSENSUS/80% hhpplhp.ht.t.tt.........llElGsG.GtlT..lhph...sttlhshEhD.phh. CONSENSUS/65% hlppIlptsphptss........hllEIGsGhGsLTp.Lhcp...upplhAlElDtchst CONSENSUS/50% llc+Ilcsuslsps-........sVlEIGPGpGuLTctLlcp...uccVsAlElDs+Lss Q54094/41-281 SLREKLSG-----HPNIEVVNADFLTAEPPP-------------------EPFAFVGAIP CONSENSUS/80% .Lpphh.........phpllttDhhphthst......................hlhuNlP CONSENSUS/65% hLppphtt......tplpllptDhLphchsp...................t.hplluNlP CONSENSUS/50% pLpc+hss......sclpVlpsDsL+hchPp...................psh+VVuNLP Q54094/41-281 YGITSAIVDWCLEAPTI---------ETATMVTQLEFARKRTGDY---GRWSRLTVMTWP CONSENSUS/80% atloo.lhhphh.t............pthhlhhQhEhup+hhu.......hs.lslhht. CONSENSUS/65% YpIoosllh+llttt...........pshslhhQpEhAcRhsut....ttastLolhhph CONSENSUS/50% YsIoosllt+LLppssh........hpsuslMlQ+ElAcRlsApP.sscsYupLoVhsph Q54094/41-281 LFEWEFVEKVDRRLFKPVPKVDSAIMRLRRRA CONSENSUS/80% hhphphhhtls.p.FhP.PpVpoullhl..p. CONSENSUS/65% hhchchlhpVstpsFhP.PcV-Sullplp.+p CONSENSUS/50% as-lchlhcVs+ssFpPsP+VDSull+lc++s
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |