ICEberg_61 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ ICEberg_61 -----------MALIGFARVSTQQ--QDLSEQIQVLKEY----GC--K--KIFSGK-HSG CONSENSUS/80% .............hhuYsRVSo.p..Qs.phQ.pth.th....Gh..p..+lap-h.hSG CONSENSUS/65% ............hhlGYsRVSTt-..QshphQhctLpth....Gs..c..+lapDp.sSG CONSENSUS/50% ............htIGYARVSTsD..Qss-tQc-sLpth....Gs..-..+lFsD+.uSG ICEberg_61 K-AEKNKAQLDELL--DYVREGDVVAVTKLDRLGRSL-AQCLNTLELFKNKNIGFVAIQ- CONSENSUS/80% t..ptpRPtLpthl..t.hRtGDsllVhplDRLuRsh..clhphsppLpptslthh.lp. CONSENSUS/65% p..cscRPtLcphL..thhRpGDsllVh+LDRLGRsh.tcLlpllppLpp+GVthtsLp. CONSENSUS/50% s..cscRPGL-clL..stlRsGDoLVVa+LDRLGRSl.cDLlslVpcLscRGVulcsLs. ICEberg_61 --QGID-----------T-RTQNNPMGMALIQLLGIFAELERSFIVERTQEGKRTKLASG CONSENSUS/80% ...ths...........h....sos.uphhhplhuuhAcaERtLlhERpptGhthA+t+G CONSENSUS/65% ..tthD...........h....soshGphhhplhuuhAEFERsLItERopsGlssA+sRG CONSENSUS/50% ..pslD...........s....oSstGcLlFslhuAlAEFERcLI+ERT+uGlAsA+ARG ICEberg_61 HKNALGGRPPKVTDKIR--KKIY-------ADFKAGDSISTVMKRYDLSKSTVARLKGIY CONSENSUS/80% ...thhGR..ths.t....t.h.........hhtts.shptlucphtls+pTlhphht.. CONSENSUS/65% ...+htGR..tlsppp...t.h........thhptGhshpplAcphsloRsTlY+hltpt CONSENSUS/50% ...+psGRppsLsscpp..phlp.......phhssGpolsslA+phulSRsTlYRaLscp ICEberg_61 NRENLMSEE--------------------------------------------------- CONSENSUS/80% t........................................................... CONSENSUS/65% t........................................................... CONSENSUS/50% stt......................................................... ICEberg_61 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ ICEberg_61 - CONSENSUS/80% . CONSENSUS/65% . CONSENSUS/50% .
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |