ICEberg_238 ----------------------------------------MLAADPNLKCVVCYARISFD CONSENSUS/80% ............................................t...h+suhYsRlSpp CONSENSUS/65% ..........................................phcp..h+lAhYsRlSs- CONSENSUS/50% ........................................thppc+..h+VAlYsRlSo- ICEberg_238 GR--VKDA-HGIEDQHRDMSEA--ARRFGW---LIVYRYTDNDKSASKESVVRDDFEQLL CONSENSUS/80% pt...pt...ShtsQhthhpch...tppth....hht.YhDtuhSG.p...pR.tFpphh CONSENSUS/65% sp..hpt..tShpsQhphhs-a..hpppsa...hlsthYtDpGhSG.s..hpRssFpcMh CONSENSUS/50% cp..scstpsSlcsQ+phhs-a..spcsca...plsspYsD-GhSGpst.pcRsuFpRMl ICEberg_238 ADLAAGATPEGYPVHGVMAVNDDRLYRRPSDWERYLKAFTSQ----DGRV--YHDSNGLQ CONSENSUS/80% tDhtsGp...s....hllstshSRhuRs.hphhphhc.hh......sVth..hh.pctls CONSENSUS/65% pDlpsGc...s....hlIsKslSRhuRNhl-hhphlc.lhsh....sVph..ht.s-slD CONSENSUS/50% pDlcsG+h.hs....hVIlK-lSRFuRNsLDhhpYlcplpsh....sVcl..IslsDslD ICEberg_238 DLYA---EGFEIKGLVGVAMSLSETRKKQRRSRNSHRSRA-IRGQSV---SAWRPFG--W CONSENSUS/80% ohpt...tt..hhshhs.l.sp..scphShplppuhptph.tpGthh...tsh.sYsh.. CONSENSUS/65% ohpp...psphllslhuhl.sph.scslStpl+puhpp+h.ppGchh...suhhsYsYh. CONSENSUS/50% Tlsp...ssclllslhull.u-hEu+cISt+l+suh+s+u.ccGcah...uuhsPYGYph ICEberg_238 ---ED-------------DKVTLRPDEA--EAIRTAVHDVIAGA-SISEITRRWKEAGFI CONSENSUS/80% ...pp.............tplhls.ptA...hl+hIac.hhpGh.u..tIup.Lpppth. CONSENSUS/65% ...ps.............t+lhlspcpA...lV+pIFchhlpGt.usppIu+hLpcpslh CONSENSUS/50% ...cD.............pKllIDE-EA..pIVRcIF-psl-Gs.osppIA+pLpccGIh ICEberg_238 TS---R--------------G----NP-FQY---QTVKQVLVNARLCGYREIKGEIVRD- CONSENSUS/80% ss..................t.......Wstt...tl.thLpN.hYhGphh.ttp.h... CONSENSUS/65% ss...t..............s....p.hWsts...slttILcN.tYtGphlht+php.ph CONSENSUS/50% oP...p..............G....pspWsss...oVppIL+NcpYpGchlhsKphsscs ICEberg_238 ------------------G-DDQ-P-IVGEWEAIVTPKQWFAVTA------KIRERGHGT CONSENSUS/80% h..........ttp....spp...hh..stHEsIlsp-.aptspt.h.t.tt........ CONSENSUS/65% h..........p+p.h.hscpchhhh..stHEuIlscEha-tsQphhtpptp........ CONSENSUS/50% p..........p++pcphsEc-hhhl.cNsHEuIIocEsF-plQchlpp+p+ptt...t. ICEberg_238 GTPRGGLVHKYLLTNILRCGNVLEDGTVCNNKMIGIKANDWLKY---------QHAYMCK CONSENSUS/80% ....t......hhpshh.s.........ss..h....t...............hhha.h. CONSENSUS/65% ....pthshphhhpulhhCs........CGpthh...tpt........s..p.phhatC. CONSENSUS/50% ..p.cphspcthlsGllpCss.......CGcphs...spph....t.ts.hc.chhYpCp ICEberg_238 K-TVD-GGCNKTY--KRGDKTDKIIEELVIAKLERDAATKAQ------------------ CONSENSUS/80% ..t....t..hs..........t.l.t.h.t.h.p.h....................... CONSENSUS/65% p.ph..hst.hsp..t.h.h.tp.l.phl.p.lpphht........hh............ CONSENSUS/50% p.+t..tGsphCp..p.+hIp-csl-ptlh-slpchhssssp....hhp.hppthptp.. ICEberg_238 ---DVPDWDK--------AEALERALQSRRELERRWHD-DEDTDIDDEAFFRNLPVLERR CONSENSUS/80% ........t............hpp...t......phhp.........t.h.......... CONSENSUS/65% ....ttthp...........phppphtphcph.tphhc....tphspcta..hhtph.pp CONSENSUS/50% ....pcplc...........slp+plpplcphhp+lh-chh.tclsccpatpphpchpsc ICEberg_238 I----------KELRVDQKAHEALKAEAEEAEADIRKSWGAKTLT--------------Q CONSENSUS/80% ......h.tphp.l..t..p.tt..t.................................. CONSENSUS/65% .....th.tchptlc.phtp.pt.ppthp....t.h..h.t........hst........ CONSENSUS/50% h....plhpchcpLchslpctcppppplc....phhthltp.....hpchsc........ ICEberg_238 KREAMKKVLGAVIALPGGKGNKTFDPD---LLKPVWKTSE-------------------- CONSENSUS/80% ....hhp.hlppl.h................ht..ap....................... CONSENSUS/65% ...thhptllpplhl.ttpt...........hphhaK..h.................... CONSENSUS/50% ...pllcpll-cIhlhppct.sp........hpIhaKhsh.................... ICEberg_238 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ ICEberg_238 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ ICEberg_238 ------------------------------------- CONSENSUS/80% ..................................... CONSENSUS/65% ..................................... CONSENSUS/50% .....................................
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |