IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ---------------------------------------------MNLADWAESVGV--- CONSENSUS/80% ............................................................ CONSENSUS/65% .............................................hp.tphsph.sl... CONSENSUS/50% ............................................hhphtchuchlGl... IS1535 ---NRHTAYRWF---REGTLPVPAER----VGRLI------LVKTAA------------- CONSENSUS/80% ...................h........................................ CONSENSUS/65% ...sh.Thhpa....ppGhl....hh......ss..............h........... CONSENSUS/50% ...ohpTLh+Wt...+pGhlp.shcp......sGp.............ph..as.ppl.t IS1535 ----------------S--ASAAAAGVVLY-AR--VSS--HDR-R--SDLDRQVARLTAW CONSENSUS/80% ..........................hhhY.sR..VSs...tp.t...pL.pQht.l..h CONSENSUS/65% .........................tslhY.uR..VSo..tpQ.+..sDLppQhthlpta CONSENSUS/50% hht...................tppcsllY.AR..VSS..pcQ.K..sDLcRQlphLcpa IS1535 A---TER-DLGV---GQVV--------CEVG-------------------SGLNG----- CONSENSUS/80% h....t...h......phh........p-lu...................oGhs...... CONSENSUS/65% s....tp.sh......cll........p-lG...................SGlNh..... CONSENSUS/50% s...sup.Gash...s-ll........sDlG...................SGLNh..... IS1535 ------------------KRP---------KLRRIL-SD---PD-------ARVIVVEHR CONSENSUS/80% ..................p.+.........th.tlh.t.....p.......hthlllta. CONSENSUS/65% ..................p.+.........thhpLl.p....sp.......lpplllta+ CONSENSUS/50% ..................cpR.........sLhcLL.cplhpsc.......VcplVlsH+ IS1535 DR---L-------ARFGVEHL-EAALSAQG--RR---I-VVADPG-E------------- CONSENSUS/80% DR...h.......hRhGhphh...hht..t..hp...l..llt................. CONSENSUS/65% DR...L.......sRFGh-hl.cthhpt.s..sc...l.hllsp..c............. CONSENSUS/50% DR...L.......sRFGaEhl.EphhptpG..sc...l.lVlspt.E............. IS1535 ----------T-TDDL-VCD-----------------------MIEV------------- CONSENSUS/80% ............pp-h.htD.......................hhtl............. CONSENSUS/65% .........p..pp-L.spD.......................llpI............. CONSENSUS/50% ........hss.ccEL.VcD.......................llsI............. IS1535 -------------LTG-------M--CARLYGRRGARN--RAMR----AVTEAKR-EPGA CONSENSUS/80% .............lts.......h..ss+lhu.+t.t...t................... CONSENSUS/65% .............lps.......a..uu+LYGhRthcp..ph......t..t........ CONSENSUS/50% .............los.......F..uuRLYGpRut+p..+thhpt..th.tttt..... IS1535 G----------------------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ IS1535 ------------------ CONSENSUS/80% .................. CONSENSUS/65% .................. CONSENSUS/50% ..................
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |