Q4IC79_GIBZE/64-172PKTLTHAYMVCGVGREPSQWV--------------------------KAPTPAQGKIGHM CONSENSUS/80% ..thhphhh.hsh............................................... CONSENSUS/65% .tphh-hhhhlshstt............................................ CONSENSUS/50% ss+lh-aFllVuhsps............................................ Q4IC79_GIBZE/64-172KGAVGQFWLP-----EILGSSPRL-----------EQDNEI---ARALH-SAMRACFPHD CONSENSUS/80% ......th.s.....tlh.paP.t..............p.........t.l.ha.ChP.s CONSENSUS/65% .....tshps.....plltpaPpp............hps.......h.pslshF.ChPpu CONSENSUS/50% ..s.tpsacP.....clLp+aPcc............pp-p.....phscslshF.CFPpG Q4IC79_GIBZE/64-172VEICT-------------------GRSQPHCVHHSFVL-QQDSSH-TLYGICLR-VW CONSENSUS/80% ht............................sphasFsl Tt.sup.phauhsh.... CONSENSUS/65% hph.....................pspp.ssphaoFlL Ts.-up.+haGhChp.hh CONSENSUS/50% hshtt...................sssppsspaFoFVL TcpDGs.+pYGaClp.ha
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |