5057.CADACLAP00008898_from_51_to_149NIMGR-FICRNRACSSKGWGSKKIAITIRMY------------------PGEKYNARVYH CONSENSUS/80% phhuh.FpC..ppCt.ttWtStpshhh........................s...hh.ht CONSENSUS/65% pshuc.FpC..spCp.psWsSuplhllh+hh..................ttGpsphplat CONSENSUS/50% +saGR.FpC..SpCs.+sWsSAcVtllFHhphp...............pppGpV+MRlFu 5057.CADACLAP00008898_from_51_to_149QRCKDCNW---LSRPILDASYADRV-----AYRIKKWQGIQ-----METPYFSG--ESKG CONSENSUS/80% QpCp.Ct.........h...ph..l..ph..hhhpph.t..............t....pt CONSENSUS/65% QpC+pCpt...ht.sphs.pphptlhpplh.plhpphatpt.........hh.t..p.ps CONSENSUS/50% Q+C++Css.s.h-tPpass-slccllssLsp+Ilc+aYscs..t...chsstpc.hshcu 5057.CADACLAP00008898_from_51_to_149PHNRDLCEGCRHG CONSENSUS/80% .Hptt.CptCt.t CONSENSUS/65% sHppphCEuCp.G CONSENSUS/50% PHcpchCEACcpG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |