Family alignment for the AAA_PrkA domain, displayed in

                        cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 Q747C6_GEOSL/1-0  100.0% 100.0%     M--------------------------ILEQGIDKVTV----------NGRMTYDFRI-FR----TGRKHPIG--MYDEI    
 2 Q9HRD5_HALN1/1-0   94.4%  13.9%     MSLAEYVDRAFEQPLAAAHASRYLLAAIESAGTREVVE----------NGERAQRYRF-FDDPHNDGEHAVLG--NTATL    
 3 Q5V372_HALMA/22-0  94.7%  15.1%     MSLAEYVDTVLETPQVAAHASKYLLDAIEDAGTRMVIE----------EGEEKERYRF-FDDPYNDGEHAILG--NTEVL    
 4 Q5V373_HALMA/27-0  90.9%  17.0%     NTFDWYLQQLYDEPKIARNAHQRVADMFDYYGKSYDEE------------AGVVEYELASEDPLHDGENTFYGRVIHEAM    
 5 Q9HRD4_HALN1/24-0  91.2%  17.3%     QSFQWYLDTLYDDPTVARNAHQRLADMFDYYGKTTDDD-------------GVVEYRLASEDPLGEGANTFFGREVHESI    
 6 Q8ED82_SHEON/19-0  86.9%  17.5%     YTLQEFLDICKEDRSAYMSASERLLLAIGEAEIIDTAK--NPTLSRIFSNRLISRYPA-FK--------DFFG--MEDAI    
 7 Q74U06_YERPE/19-0  86.9%  17.3%     FTLQEFLAICQQDRSAYANAAERLLMAIGEPVMVDTAL--ESRMSRLFSNRVIARYPA-FE--------EFYG--MEEAI    
 8 Q5E3Y0_VIBF1/19-0  53.3%  17.3%     MSLQDFLSLCSNDKSAYANAAERLLLAIGEPEIIDTAL--DPQLSRIFSNRVISRYET-FK--------DFYG--MEEPI    
 9 Q9I5U9_PSEAE/19-0  85.9%  17.8%     YSLQEYLDLCKQDKTAYASAAERLLMAIGEPELLDTSV--DSRLSRIFSNKVIRRYPA-FA--------DFHG--MEECI    
10 Q7W405_BORPA/38-0  85.6%  17.3%     ------LSLAKQDPMAYASPAERMLAAIGEPELIDTRN--DPRLSRLFSNRLVRRYPA-FK--------EFYG--LEDVI    
11 Q5P164_AZOSE/19-0  85.9%  16.5%     MSIQEYLELCKSDRSAYATSAERMLMAIGEPELVDTRV--DPRLSRIFSNKMLKLYPA-FR--------DFYG--MEEVI    
12 Q5ZRS0_LEGPH/47-0  85.9%  16.8%     MSLDEYLELCKTDPTAYANPAERLLMAIGEPELIDTRH--DPVLSRIFSNKIIHHYEV-FK--------DFYG--MEEPI    
13 Q89FE5_BRAJA/22-0  86.9%  17.8%     MSMAEYLESCRSDPMKYANAAERLLAAIGEPQTIDTAK--DPRLGRIFLNRTIRTYPA-FA--------GFYG--MEETI    
14 Q9XDF9_RHIME/1-0   28.3%  13.5%     --------------------------------------------------------------------------------    
15 Q97LI2_CLOAB/27-0  85.3%  16.5%     GTFIEYLDMVKKNPDIVKLAHKRIYDIIKSKGSEVLKPEENHRIRKIYGNESIKRYNF-FK-------NDFFG--IDKVI    
16 Q896G7_CLOTE/25-0  85.1%  17.4%     CSFLDYLDIVKENPEVCKFAHKRIYDLIIKQGFHIVDK-----------NESIKKYNF-FG-------EDFFG--IDKTL    
17 Q67RC0_SYMTH/21-0  86.1%  16.1%     GTFLDYFEIVKRNPAVADLAHARVYNMIMAAGVETKED-------------GQKVYKF-FA-------DEIFG--LEKPL    
18 Q67Q86_SYMTH/22-0  85.9%  17.6%     GTFADYLEIVARNPRVAQHAHARIYNMIVSRGVEEVNG--------------VRRYRF-FE-------QELFG--LDRAL    
19 YGL1_BACST/21-9    13.3%   9.5%     GTFAEYLEILKEKPWIAQSAHSRVYNMIKDAGIEEING--------------RKRYKF-FN-------QEIFG--LDEAL    
20 Q8EN36_OCEIH/21-0  85.9%  16.8%     GTFADYLEIIKDRPEVAQTAHSRVYNMVKSAGVEERDG--------------RRMYEF-FG-------SSIFG--LESAI    
21 Q6MR70_BDEBA/27-0  92.5%  15.4%     GTFEEYLDLVKQNPKITRNAYQRMYDMIVEEGTETYID----------FKKEVIRYKF-FDDVHNNGKDAVFG--LDVQL    
22 Q72K69_THET2/23-0  91.2%  17.0%     GSFADYLRLLKEDPRPLRTSFQRVHDMILAHGVEEYTR----------FKEKLLHYRF-FDDPFEGGKDAVFG--LDKPL    
   consensus/100%                      ................................................................................    
   consensus/90%                       ......ht.h.pp...h..s.thhh.hh...th...................h..Y.h..t........thhG...pt.l    
   consensus/80%                       hoh..alphhhpp..hht.utpRhh.hI.t.th..ht...............h.pY.h.Ft........thaG..hccsl    
   consensus/70%                       hoht-YLchhtps.thhtpAtpRlh.hIhp.th.pht.............t.htcY.h.Fp........phaG..h-csl    

                        cov    pid  81          .         1         .         .         .         .         :         . 160
 1 Q747C6_GEOSL/1-0  100.0% 100.0%     NSFV-SFVKDAAEGGSSKEMAFVLVGEPGNGKTFFVEFVCARYRDYLTRDENRKYTFRFSGMEKLGSYGKIDVIE-----    
 2 Q9HRD5_HALN1/1-0   94.4%  13.9%     NAFV-DDVRAIAAGRGKAETILWFAGPTATGKSELKRCLINGLREFSKTDAGRRYTIEWNVSDA-DRGPGLTYGEEPVDR    
 3 Q5V372_HALMA/22-0  94.7%  15.1%     NAFV-DDLRSIAAGRGKDEKIIWLEGPTATGKSELKRCLINGLREYSKTPEGRRYTVEWNVAGAGNDATSMTYGNAAIED    
 4 Q5V373_HALMA/27-0  90.9%  17.0%     HEFV-NKVKSGARGLGPEKRIKLLLGPVGSGKSDFDRQVRRYFEDYTSRDEGRMYTFRWTNLCD--------VIHDQDPA    
 5 Q9HRD4_HALN1/24-0  91.2%  17.3%     HEFV-NKVKSGARGLGPEKRIILLLGPVGSGKSDVDRQVRRYFEDYTAQREGRLYTFRWTDLCS---------VIDDQDP    
 6 Q8ED82_SHEON/19-0  86.9%  17.5%     EQIV-AYLKHSAQGLEESKQILYLLGPVGGGKSSLAEKLKSLMQKV------PIYILSANGVR-----------------    
 7 Q74U06_YERPE/19-0  86.9%  17.3%     EQIV-SYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKALMQRV------PIYILSANGER-----------------    
 8 Q5E3Y0_VIBF1/19-0  53.3%  17.3%     EQIV-SYLKHAAQGLEERKQVLYLLGPVGGGKSSLAEKLKSLMQKL------PIYVLSANGER-----------------    
 9 Q9I5U9_PSEAE/19-0  85.9%  17.8%     DQIV-AFFRHAAQGLEEKKQILYLLGPVGGGKSSLAEKLKQLMEKV------PFYAIKG---------------------    
10 Q7W405_BORPA/38-0  85.6%  17.3%     DQIV-AFFKHAAQGLEERKQILYLLGPVGGGKSSIAERLKVLMEAY------PIYALKG---------------------    
11 Q5P164_AZOSE/19-0  85.9%  16.5%     EHIV-SYFRHAAQGLEEKKQILYLLGPVGGGKSSLAEKLKSLIEKV------PFYAIKG---------------------    
12 Q5ZRS0_LEGPH/47-0  85.9%  16.8%     EQIV-GFLKHAAQGLEETKQVLYLLGPVGGGKSSIAEKLKDLMERI------PFYAIKG---------------------    
13 Q89FE5_BRAJA/22-0  86.9%  17.8%     ERIV-GFFRHAAQGLEERKQILYLLGPVGGGKSSLAERLKSLMEVH------PIYVLKAGDEL-----------------    
14 Q9XDF9_RHIME/1-0   28.3%  13.5%     --------------------------------------------------------------------------------    
15 Q97LI2_CLOAB/27-0  85.3%  16.5%     MKLM-NYFNSASMKGEEARQVLYLVGPVGAGKSSLVESIKRALEEAK-----PVYSLKG---------------------    
16 Q896G7_CLOTE/25-0  85.1%  17.4%     MKIV-NYFYAASMEGEESKQVLYLVGPVGSGKSSIVEAIKIALEDSE-----PIYALEN---------------------    
17 Q67RC0_SYMTH/21-0  86.1%  16.1%     EQLV-EYFRSAAKRLEVRKRILLLMGPVGGGKSTIVSLLKRGLERWSRTEEGAIYAIKG---------------------    
18 Q67Q86_SYMTH/22-0  85.9%  17.6%     ERLVEEYLHPAARRLDVRKRILLLMGPVSGGKSTLVALLKRGLEEYSRTPEGAVYAIRG---------------------    
19 YGL1_BACST/21-9    13.3%   9.5%     ERLVEEYFHPAAKRLDVRKRI-----------------------------------------------------------    
20 Q8EN36_OCEIH/21-0  85.9%  16.8%     ERLVEEYFHPAAKRLDVRKRILLLMGPVSGGKSTIVSMLKRGLEHYSRTDEGAVYAIKG---------------------    
21 Q6MR70_BDEBA/27-0  92.5%  15.4%     MKLV-NVLKAAALGYGTEKRVILLHGPVGSAKSTICRMLKKGLERYSHTKQGAVYTFEWIDEKL--------ELDGLLGK    
22 Q72K69_THET2/23-0  91.2%  17.0%     MRLV-ATLKAAAHRLGPERRILLLHGPVGSAKSTIARLLKKGLEAYSRTEEGKLFTFYWKTEEG--------PLP-----    
   consensus/100%                      ................................................................................    
   consensus/90%                       .thV.t.hp.hu.tht.tcplhhh.G.susuKo.h.t.lh.hhp.........ha.h.......................    
   consensus/80%                       .phV.thh+tuAttht.p+pllhLhGPsusGKSplsp.lpthhpth.......hYshph.....................    
   consensus/70%                       pplV.shh+tAAptht.cKpllhLhGPVGuGKSslschl+phhcch.......hYshch.....................    

                        cov    pid 161          .         .         .         2         .         .         .         . 240
 1 Q747C6_GEOSL/1-0  100.0% 100.0%     ------SQTYEDPMVLAMNLFESRDENREWLARE---------FGFSDRELEGLFDNYRPLGACTGYMWSDIRRFT---D    
 2 Q9HRD5_HALN1/1-0   94.4%  13.9%     EDDWYESPVQASPLSVF------PTDVREDVLAD----VNDHREDADALRADADLPPF-----SREAYDHLEQQYRREGV    
 3 Q5V372_HALMA/22-0  94.7%  15.1%     EDDWYESPVQAHPLTVF------PEDVRTDLLAE----VNERLDDHIPIRVDGQLDPF-----SREAYDFLEEQYRRQGE    
 4 Q5V373_HALMA/27-0  90.9%  17.0%     DDVVR-SPMNQDPLVLL------PQAQRDKVIEDINA-ELDAPYTI---RNEQSLDPA-----SEFYMDRLLAEY----D    
 5 Q9HRD4_HALN1/24-0  91.2%  17.3%     NDDTITSPMHQDPLVLL------PEAQRQQVIDD----LNEDLDAPYSLRNSQSLDPE-----SEFYMDELLAHY----D    
 6 Q8ED82_SHEON/19-0  86.9%  17.5%     ------SPVNDHPFCLF-----DVDEDGQLLRDE---------FNIPSRYLKTIMSPW-----AVKRL----HEF----G    
 7 Q74U06_YERPE/19-0  86.9%  17.3%     ------SPVNDHPLCLF-----NPQEDAAILAKE---------YNIPNRYLGTIMSPW-----AAKRL----HEF----G    
 8 Q5E3Y0_VIBF1/19-0  53.3%  17.3%     ------SPVNDHPFCLF-----DVYEDGELLKNE---------YGIEPRNLRSIMSPW-----AAKRL----HEF----G    
 9 Q9I5U9_PSEAE/19-0  85.9%  17.8%     ------SPVFESPLGLF-----NPDEDGAILEED---------YGIPRRYLRSIMSPW-----ATKRL----NEF----G    
10 Q7W405_BORPA/38-0  85.6%  17.3%     ------SPVNESPLGLF-----HPDRFGDTLEQE---------YGIARRYLSGIMSPW-----AVKRL----REF----D    
11 Q5P164_AZOSE/19-0  85.9%  16.5%     ------SPVHESPLGLF-----DVKEDGRLLEDD---------FGIPSRYVNTIMSPW-----AVKRL----HEF----G    
12 Q5ZRS0_LEGPH/47-0  85.9%  16.8%     ------SPVFESPLSLF-----NPLEDGELLRER---------FGIPTRYLRYLMSPW-----AVKRL----QEY----N    
13 Q89FE5_BRAJA/22-0  86.9%  17.8%     ------SPVFESPLSLF-----DPDQLGPMLEEK---------YGIPRRRLTGLMSPW-----CYKRL----EAF----G    
14 Q9XDF9_RHIME/1-0   28.3%  13.5%     --------------------------------------------------------------------------------    
15 Q97LI2_CLOAB/27-0  85.3%  16.5%     ------CPMREEPLHLI------PKHLRGEFEQL---------LGV---EIEGDLCPV-----CRYRLM---HEY----N    
16 Q896G7_CLOTE/25-0  85.1%  17.4%     ------CPMREEPLHLI------PNNLRRKFEKE---------LDL---KIEGDLCPV-----CTYRLR---EEF----N    
17 Q67RC0_SYMTH/21-0  86.1%  16.1%     ------CPMHEEPLHLI------PHELRDEIRKE---------YGI---YIEGDLCPA-----CRVMVQ---EQY----G    
18 Q67Q86_SYMTH/22-0  85.9%  17.6%     ------CPMHEEPLHLV------PRELRPMLEKE---------LGV---VIEGDLCPR-----CRLMVR---EEY----G    
19 YGL1_BACST/21-9    13.3%   9.5%     --------------------------------------------------------------------------------    
20 Q8EN36_OCEIH/21-0  85.9%  16.8%     ------CPMHEDPLHLI------PQHLREDFFQE---------YGI---RIEGSLSPL-----NTMRLD---KDY----G    
21 Q6MR70_BDEBA/27-0  92.5%  15.4%     GVKVFHSPMNEEPLLLI------PEELRSTVYDS----INKGQEGSFRVHVDGELSPP-----SRFIFKALMEKY----D    
22 Q72K69_THET2/23-0  91.2%  17.0%     ------CPMHEEPLHLL------PQDLREAFLEELRALHPDYPYPL---EVEGDLCPV-----CRFQMREGLRKY----E    
   consensus/100%                      ................................................................................    
   consensus/90%                       ......s.h.tpPh.lh........t.t..h.t...........s......t..hss......s...h....tta.....    
   consensus/80%                       ......sPh.ppPh.Lh......spp.tt.h.pc..........sh....hpt.hsPh.....shhhh....ppa....s    
   consensus/70%                       ......sPhp-pPLtLh......Ppc.tt.l.p-.........hsh...hlps.hsPh.....shhhh....pca....s    

                        cov    pid 241          :         .         .         .         .         3         .         . 320
 1 Q747C6_GEOSL/1-0  100.0% 100.0%     GDAAAMLDF-VQVVPVPLIETLGTITGKYAAKDKITSS-------AVDLLGEESIQRLLHITDVTNPYRFDLRRGALARV    
 2 Q9HRD5_HALN1/1-0   94.4%  13.9%     ADVFAAATDPKHLRVKNYVVERGQGIGVLHSEDAGSPKERLVGSWVAGLLGQLDSK------GRKNPQAFSY-DGVLSQG    
 3 Q5V372_HALMA/22-0  94.7%  15.1%     TDLFSAVTQPSHLRVKNFVVDVGRGIGILHSEDEGTPKERLVGSWMHGMLRELDSR------GRKNPQAFSY-DGVLSQG    
 4 Q5V373_HALMA/27-0  90.9%  17.0%     DDLQAVLENHVEIVRFVADENQRRGIETFEPKDKKNQD-------ETELTGDVNYSKIAIY-GESDPRAFDY-SGAFCNA    
 5 Q9HRD4_HALN1/24-0  91.2%  17.3%     DDLQAVLESHVEVVRLVASENRRDCIETFEPKDKKNQD-------ETELTGDVNYSKLAVY-GESDPRAFDY-AGAFCNA    
 6 Q8ED82_SHEON/19-0  86.9%  17.5%     GDISK-----FRVVKVYPSILDQLAIAKTEPGDENNQD-------ISSLVGKVDIRQLEHY-SQDDADAYAY-SGALCRA    
 7 Q74U06_YERPE/19-0  86.9%  17.3%     GDITK-----FKVIKVWPSILEQIAIAKTEPGDENNQD-------ISALVGKVDIRKLEHH-AQNDPDAYGY-SGALCRA    
 8 Q5E3Y0_VIBF1/19-0  53.3%  17.3%     GDITK-----FKVIKVHPSILDQIGIAKTEPGDENNQD-------ISSLVGKVDIRQLQHF-AQDDPDAYSY-PGSLM--    
 9 Q9I5U9_PSEAE/19-0  85.9%  17.8%     GDISQ-----FRVVKLYPSILNQIAIAKTEPGDENNQD-------ISALVGKVDIRKLEEY-PQNDADAYSY-SGALCRA    
10 Q7W405_BORPA/38-0  85.6%  17.3%     GDISQ-----FRVVRLNPSVLRQVAIAKTEPGDENNQD-------ISSLVGKVDIRKLERY-AQDDPDAYSY-SGGLCLA    
11 Q5P164_AZOSE/19-0  85.9%  16.5%     GDITR-----FRVVKLRPSVLKQIAVAKTEPGDENNQD-------ISSLVGKIDIRKLEEY-SQDDPDAYSY-SGGLCLA    
12 Q5ZRS0_LEGPH/47-0  85.9%  16.8%     GDISK-----FRVIKVKPSRLKQIAIAKTEPGDENNQD-------ISSLVGKVDIRKLEEF-SQDDPDAYSY-SGGLCRA    
13 Q89FE5_BRAJA/22-0  86.9%  17.8%     GDISQ-----FRVAKIQPSRLRQIAIAKTEPGDENNQD-------ISSLVGKVDIRKLETY-AQNDPDAYSY-SGGLNRA    
14 Q9XDF9_RHIME/1-0   28.3%  13.5%     -----------------------------EPGDENNQD-------VSSLVGKVDIRQLENY-SQADPDAYSY-SGGLNRT    
15 Q97LI2_CLOAB/27-0  85.3%  16.5%     GEYEK-----FPVITSGFSIRSRKGIGVVPPVDPNNQD-------TSILTGSIDISKMDLY-PEDDPRIFSL-NGAFNVG    
16 Q896G7_CLOTE/25-0  85.1%  17.4%     GEIEK-----FPVQKIGFSIKERRGVGVVPPVDPNNQD-------TSVLVGSVDISKMDIY-SEHDPRIFSL-NGAFNVG    
17 Q67RC0_SYMTH/21-0  86.1%  16.1%     GRVED-----VIVQRIAFSEKNRVGIGTFTPSDPKSQD-------ISELTGSVDLSTIGQYGTESDPRAYRF-DGELNVA    
18 Q67Q86_SYMTH/22-0  85.9%  17.6%     GRIEE-----VPVVRVFLSEADRVGIGTFSPSDPKSQD-------IADLTGSIDFSTIGEYGSESDPRAYRF-DGELNKA    
19 YGL1_BACST/21-9    13.3%   9.5%     --------------------------------------------------------------------------------    
20 Q8EN36_OCEIH/21-0  85.9%  16.8%     GKIED-----VKVERIFFSEDKRIGIGTFSPSDPKSQD-------IADLTGSIDFSTIAEFGSESDPRAYRF-DGELNKA    
21 Q6MR70_BDEBA/27-0  92.5%  15.4%     GNLMQVLSH-VRVKRLFISEADRVGIGTFQPKDEKNQD-------STELTGDINYRKIAEYGSDSDPRAFNF-DGEFNVA    
22 Q72K69_THET2/23-0  91.2%  17.0%     GDLAALLEHEVVVKRLVLSEKDRVGIGTFQPKDEKNQD-------STELTGDINYRKVALYGSDSDPRAFNF-DGELNIA    
   consensus/100%                      ................................................................................    
   consensus/90%                       sph.t.......l.........t.hhthh.s.D.ts.c........s.LhGpls.p......sppssphath.sG.hs.s    
   consensus/80%                       scl.t.....h.l.hh..s..pthuluhhpPtD.psQD........stLsGplshppht.a.spsDPcAasa.sGths.u    
   consensus/70%                       G-ltt.....h.Vh+l..S..pphuIuphpPtDtpsQD.......hotLsGplDhpplt.a.upsDPcAasa.sGsLshu    

                        cov    pid 321          .         .         :         .         .         .         .         4 400
 1 Q747C6_GEOSL/1-0  100.0% 100.0%     AGGGIHFSDEI--YKNKKDLVQVYLGVIQNRVIEIDGY--RWPIDTLIIATSNNAEFNRFLAEKEE-----APIIDRCRI    
 2 Q9HRD5_HALN1/1-0   94.4%  13.9%     N-GCLTIMED---ASQHADLLQKLLNVPDERRVKLDKGIGMDLDTQLVVISNLDLEAQLNKHDDRQGFDPLKALKRRLSK    
 3 Q5V372_HALMA/22-0  94.7%  15.1%     N-GLLTVVED---AAQHADLLQKLLNVPDESHVKLDKGIGMDVDTQLVIISNPDLEAQLNKHADREGQDPLKALKRRLDK    
 4 Q5V373_HALMA/27-0  90.9%  17.0%     NRGIFSGEEL---LKLQREFLYDFLHASQEQTIK-PKNNPRIDIDQVIVGRTNMPEYRDKKGDEKM-----EAFNDRTKR    
 5 Q9HRD4_HALN1/24-0  91.2%  17.3%     NRGIFSGEEL---LKLQREFLYDFLHATQEQTIK-PKNNPRIDIDQVIVGRTNMPEYQDKRADEKM-----EAFNDRTKR    
 6 Q8ED82_SHEON/19-0  86.9%  17.5%     NQGIMEFVEM---FKAPIKVLHPLLTATQEGNYNGTEGLSALPYSGIILAHSNESEWSTFKNNKNN-----EAFLDRVYI    
 7 Q74U06_YERPE/19-0  86.9%  17.3%     NQGIMEFVEM---FKAPIKVLHPLLTATQEGNYNGTEGISALPFSGIILAHSNESEWVTFRNNKNN-----EAGLDRVYI    
 8 Q5E3Y0_VIBF1/19-0  53.3%  17.3%     --------------------------------------------------------------------------------    
 9 Q9I5U9_PSEAE/19-0  85.9%  17.8%     NQGLMEFVEM---FKAPIKVLHPLLTATQEGNYNSTEGLGALPYSGIILAHSNESEWHSFRNNKNN-----EAFIDRIYI    
10 Q7W405_BORPA/38-0  85.6%  17.3%     NQGLLEFVEM---FKAPIKMLHPLLTATQEGNFKGTEGFSAIPFNGMILAHSNESEWQTFRNNKHN-----EAFLDRIYI    
11 Q5P164_AZOSE/19-0  85.9%  16.5%     NRGLLEFVEM---FKAPIKVLHPLLTATQEGNYKGTEGFGAIPFDGIVMAHSNESEWVAFKNNRNN-----EAFLDRIYT    
12 Q5ZRS0_LEGPH/47-0  85.9%  16.8%     NRGLLEFVEM---FKAPIKVLHPLLTATQEGNYNATEGLSAIPFEGIILAHSNESEWQSFRNNKNN-----EAFIDRINI    
13 Q89FE5_BRAJA/22-0  86.9%  17.8%     NQGILEFVEM---FKAPIKMLHPLLTATQEGNYIGTENIGAIPFTGIILAHSNEAEWASFKANKNN-----EAFIDRICV    
14 Q9XDF9_RHIME/1-0   28.3%  13.5%     TQGLLEFVEMFKAFKAPIKVLHPLLTATQEGSYNGTENFGAFPFQGTILAHSNESEWLQFKNNRT---------------    
15 Q97LI2_CLOAB/27-0  85.3%  16.5%     NRGLVEFIEV---FKNDVEYLHTIITATQEKSIPSPGKGAMIYFDGLIIAHSNEAEWNKFKSDHTN-----EAILDRIVK    
16 Q896G7_CLOTE/25-0  85.1%  17.4%     NRGIVEFIEI---FKNDIEYLHSIITATQEKLIPSPGKGSMVYYDGVIIAHSNEGEWNKFKSDPTN-----EAILDRIVK    
17 Q67RC0_SYMTH/21-0  86.1%  16.1%     NRGLMEFIEM---LKCDEKFLYGLLTLSQEQSIK-TGRFAMIYADEVIVSHTNENEFNAFVNNKKN-----EALKDRMIL    
18 Q67Q86_SYMTH/22-0  85.9%  17.6%     NRGIMEFQEM---LKLDEKFLWHLLSLSQEGNFK-AGRFALISADELVVAHTNETEYRAFIANKKN-----EALQSRIIV    
19 YGL1_BACST/21-9    13.3%   9.5%     --------------------------------------------------------------------------------    
20 Q8EN36_OCEIH/21-0  85.9%  16.8%     NRGMMEFQEI---LKSDEKFLWHLLSLTQEGNFK-AGRFALISADELIIAHTNESEYKSFISNKKN-----EALHSRMIV    
21 Q6MR70_BDEBA/27-0  92.5%  15.4%     NRGMIEFVEV---LKLDVAFLYDLLGASQEHRVK-PKKFAQTHIDEVIIGHTNEPEYRRLQDNEFM-----EALRDRTVK    
22 Q72K69_THET2/23-0  91.2%  17.0%     NRGIVEFIEI---LKLDVAFLYDLLTASQEHKIK-SKKFAQTDIDEIVLGHTNEPEYRKLQANEYM-----EALRDRTIK    
   consensus/100%                      ................................................................................    
   consensus/90%                       s.Ghhph.-....ht...thl..hlth.ppt.h..st.......pthlh.ps...Eh....tt.................    
   consensus/80%                       NtGhhph.E....hK...chL..hLshsQEtph..stt.shh.hstlllupoNpsEa.thhsscp......cAh.pRh.h    
   consensus/70%                       NpGlhcF.Eh...hK..hchLaslLssoQEtphp.stthuhh.hstlllu+oN-sEapthpsscp......EAhhcRhhh    

                        cov    pid 401          .         .         .         .         :         .         .         . 480
 1 Q747C6_GEOSL/1-0  100.0% 100.0%     CYVSHNTHYRMQEQLTDYAIGGETKTT------------------------LTKEELHQDPNLNYAASVAVTLSRLPRSE    
 2 Q9HRD5_HALN1/1-0   94.4%  13.9%     HELGYLTSISLEAQLLRRELTGDAGVWTATDPEVLAERAAQPVTVSVRDD-DGETERELAPHTIEAAALYSVVTRLDDDD    
 3 Q5V372_HALMA/22-0  94.7%  15.1%     HEFTYLTNLSLEAQLLRRELTNETQVWDPETWDELETWIQEPLSISVRDQVETATEKELAPHTVESAALYAVVSRLDSAE    
 4 Q5V373_HALMA/27-0  90.9%  17.0%     IDFPYVLQYEAEANIYQKMLRN-----------------------------ADLPDIQVEPHTLEMAGLFGVLTRIEEPD    
 5 Q9HRD4_HALN1/24-0  91.2%  17.3%     VDFPYVLEYDREAKIYEKLLGN-----------------------------ADVPDIHVEPHTLTMAGLFGVLTRIREPD    
 6 Q8ED82_SHEON/19-0  86.9%  17.5%     VKVPYCLRVSEELQIYKKLIQN-----------------------------SELSQAPCAPGTIETLAQFSVLSRIKAPE    
 7 Q74U06_YERPE/19-0  86.9%  17.3%     VKVPYCLRVSEEIKIYDKLLQN-----------------------------SELTHAPCAPGTLETLARFSILSRMKEPA    
 8 Q5E3Y0_VIBF1/19-0  53.3%  17.3%     --------------------------------------------------------------------------------    
 9 Q9I5U9_PSEAE/19-0  85.9%  17.8%     VKVPYCLRVADEIKIYDKLLVN-----------------------------SSLAHAHCAPDTLKMLSQFSVLSRLKEPE    
10 Q7W405_BORPA/38-0  85.6%  17.3%     VKVPYCLQVSEEVCIYEKLLRH-----------------------------SSLAQAPCAPGTLDMMAQFSVLTRLKEPE    
11 Q5P164_AZOSE/19-0  85.9%  16.5%     VKVPYCLRVSDEIHIYEKLLTE-----------------------------SSLAAAPCAPDTLRMMAQFATLSRLKEPE    
12 Q5ZRS0_LEGPH/47-0  85.9%  16.8%     VKVPYCLRVSEEIKIYQKLIHN-----------------------------SSLANAPCAPGTLDMLAQFSVLTRLKEPQ    
13 Q89FE5_BRAJA/22-0  86.9%  17.8%     IKVPYVLRVTEEQKIYEKLIQG-----------------------------SELASAPCAPSTLETMARFSVMSRLRKHE    
14 Q9XDF9_RHIME/1-0   28.3%  13.5%     -------------------------------------------------------------------------TRL----    
15 Q97LI2_CLOAB/27-0  85.3%  16.5%     IEVPYCLELNEEKKIYEKILK------------------------------KSNFTAHIAPHTLSVAAMFAVLSRLKPSS    
16 Q896G7_CLOTE/25-0  85.1%  17.4%     IEVPYCLELDEEKKIYKKILK------------------------------NSNFQVHIAPHTIDVAAMFAILTRLNSSE    
17 Q67RC0_SYMTH/21-0  86.1%  16.1%     VRVPYNLRVDDEVKIYEKLIND-----------------------------SGLKGIHIAPHTLRIASLFAILTRLEPSK    
18 Q67Q86_SYMTH/22-0  85.9%  17.6%     IPIPYNLRVSDEVRIYEKLIRQ-----------------------------ADTGHVHIAPHALYTAAVFSVLSRLKESQ    
19 YGL1_BACST/21-9    13.3%   9.5%     --------------------------------------------------------------------------------    
20 Q8EN36_OCEIH/21-0  85.9%  16.8%     MPIPYNLKVSEEERIYQKMIKE-----------------------------SDISHVHVAPHALRAAAIFSILSRLKESK    
21 Q6MR70_BDEBA/27-0  92.5%  15.4%     IDIPYITRWRDEINIYKRDFNS-----------------------------QKVRGISIAPHTVEMAAMWAILTRLEKPK    
22 Q72K69_THET2/23-0  91.2%  17.0%     IDVPYILRVSDEVRIYQRDFA-------------------------------KVRGKHIAPHTLEMAATWAVLTRLEPPK    
   consensus/100%                      ................................................................................    
   consensus/90%                       .........................................................................oRh....    
   consensus/80%                       h.hsY.hphp.E.plhp+.ht...............................t..th.htPtsl.hhu.auhloRlp.sp    
   consensus/70%                       hclPY.hphstEhpIYp+.ltt.............................tph.th.hAPtTlphhu.aulLoRLctsp    

                        cov    pid 481   ] 483
 1 Q747C6_GEOSL/1-0  100.0% 100.0%     KLT    
 2 Q9HRD5_HALN1/1-0   94.4%  13.9%     HGD    
 3 Q5V372_HALMA/22-0  94.7%  15.1%     IPT    
 4 Q5V373_HALMA/27-0  90.9%  17.0%     NES    
 5 Q9HRD4_HALN1/24-0  91.2%  17.3%     TDA    
 6 Q8ED82_SHEON/19-0  86.9%  17.5%     NSS    
 7 Q74U06_YERPE/19-0  86.9%  17.3%     NSS    
 8 Q5E3Y0_VIBF1/19-0  53.3%  17.3%     ---    
 9 Q9I5U9_PSEAE/19-0  85.9%  17.8%     NSN    
10 Q7W405_BORPA/38-0  85.6%  17.3%     NSS    
11 Q5P164_AZOSE/19-0  85.9%  16.5%     NSS    
12 Q5ZRS0_LEGPH/47-0  85.9%  16.8%     NSS    
13 Q89FE5_BRAJA/22-0  86.9%  17.8%     NST    
14 Q9XDF9_RHIME/1-0   28.3%  13.5%     ---    
15 Q97LI2_CLOAB/27-0  85.3%  16.5%     KVD    
16 Q896G7_CLOTE/25-0  85.1%  17.4%     KVD    
17 Q67RC0_SYMTH/21-0  86.1%  16.1%     KAG    
18 Q67Q86_SYMTH/22-0  85.9%  17.6%     RAG    
19 YGL1_BACST/21-9    13.3%   9.5%     ---    
20 Q8EN36_OCEIH/21-0  85.9%  16.8%     KQG    
21 Q6MR70_BDEBA/27-0  92.5%  15.4%     KAN    
22 Q72K69_THET2/23-0  91.2%  17.0%     RAG    
   consensus/100%                      ...    
   consensus/90%                       ...    
   consensus/80%                       p.s    
   consensus/70%                       pss