cov pid 1 [ . . . . : . . . 80 1 END4_BACSU/1-2 100.0% 100.0% RIGSHVSMSGKHM-LLAASQEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMQEN---GIDEIIVHAPYIINIGN 2 AAF30715_s/1-2 99.3% 44.6% IIGSHVSLKAKDF-FYGSVKEALSYGSNTFMVYTGAPQNTKRQPIKSFKIEEAHNLLKKHNI-NLDDLIVHAPYIINP-C 3 END4_MYCPN/1-2 98.2% 37.5% LLGSFISFKSPHY-LVGSVRDAVSIKAQAFMIFLGAPHTALRVDPNRMQIDEGHTLMEQHNL-SKSGMVVHAPYIINC-A 4 END4_MYCGE/1-2 98.2% 34.0% LLGSFISFKAPNY-FVQSAQDAIAIDATALMVFLGPPHSAYRVPFNKMQFSLGYELLKTKNI-NSNGLVVHAPYIINC-A 5 END4_ECOLI/1-2 96.1% 30.2% YIGAHVSAAGG---LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHY-TSAQILPHDSYLINL-G 6 APN1_CAEEL/1-2 95.8% 29.2% MLGFHVSAAGG---LEQAIYNARAEGCRSFAMFVRNQRTWNHKPMSEEVVENWWKAVRETNF-PLDQIVPHGSYLMNA-G 7 SCAPN1_1_t/1-2 96.8% 27.4% KFGAHMSGAGG---ISNSVTNAFNTGCNSFAMFLKSPRKWVSPQYTQEEIDKFKKNCATYNYNPLTDVLPHGQYFINL-A 8 O94604_spt/1-2 96.8% 25.7% MIGAHISAAGG---VFNALINMKNINANSCAFFVKSQRKWTSPDLSEDVAQKFLETASEMKFDASKQVLVHGSYLINM-A 9 O84630_spt/1-2 95.8% 31.0% LLGAHTSAAGG---LHNALYEGRDIGATTVQLFTANQRQWKRRTLTQEMVDQFRIALNETSL---SYIMSHAGYLNNP-G 10 Q9Z7H3_spt/1-2 95.8% 30.0% LLGAHTSTAGG---LKNAIYEGRDIGASTVQIFTANQRQWQRRALKEEVIEDFKAALKETDL---SYIMSHAGYLINP-G 11 Q9WYJ7_spt/1-2 95.4% 30.0% KIGAHMPISKG---FDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGID-WENAFCHSGYLINL-A 12 O67551_spt/1-2 95.1% 28.4% LFGAHVSSAGS---ILKTFKRAKDIGAEVFQFFLRSPRAWYWKGVDKETKQAFIEKLKDFKN----PVMVHAPYLLNL-A 13 Q9YA35_spt/1-2 94.0% 16.4% LGVIRFGPAGKPV-EFKGDIVKVPEFLRSIGLDALEYEAVRGVRISEAKARRLGEAARENG----VILSMHAPYYVNL-S 14 O27091_spt/1-2 92.6% 16.8% LFLIRVGPAGNPV-GYRGSTVNVFSKIRAMGLDAYEYQATYGLRLKKENAIRIGENSRKND----ILVSMHGPYYINL-S 15 O59568_spt/1-2 93.3% 15.8% IDRLRFGTAGIPISTPKPSTIAGIERVRELGLDAMELEFVRGINIKPELAKKIKYVAEKND----IVLTAHAPYYINL-N 16 CAB51959_s/1-2 96.1% 27.6% PVGGHVPVAGGL--HSVGLSYARELKAEAVQVFVANPRGWATPAGNPKQDEAFREACAAGS----VPAYVHAPYLINF-G 17 END_MYCLE/1-24 87.6% 26.1% LIGSHVSSTDP-------LAAAEVEGADVVQIFLGNPQSWKAPTLRSDADVLKATALP---------VYVHAPYLINV-A 18 Q9YVX5_spt/1-2 91.2% 17.7% LIGFHTTKD---------FIKEYAN-EYVLQFFLGSPFSY----LSSTTPIPFKANKHN-------KIFIHSKYVGNIAN 19 Q65202_spt/1-2 92.2% 17.7% DSGCTTTCITNSIANYVAFGEQIGFPFKSAQVFIAGPRKAVINIQEDDKVELLKMIVKHN-----LWVVAHGTYLDVP-W 20 Y133_METJA 91.2% 13.0% EIMLIFGTAGVPI-SAEDEFKAVDV-LRKLNLGAMELEFVKGVYMKEDYAKKLKEYGED------IIFSAHAPHYINLNA 21 P95930 91.5% 17.5% PAGVPHSAKKK------NTVEGIRT-VKELGLNAMEVEFVQGVRMSKETAEETGQVARELG----VRLSVHAPYFINL-C consensus/100% ..h..hs......................h.h..h....h.....p......hh.............h..Hs.ah.s... consensus/90% .hh.hhs.tt.......s...th...hp.h.h.hht.p.h.....pp.....hh..htp........h..HusYhhN..s consensus/80% hhG.phuhts.......s.htsht..hpshthhhht.pth.t..hppt.hpthtthhpp........lhsHusYhlNh.s consensus/70% hhGs+hossus...h.tshhpuhshtspshtlahts.cthht..hpppthpthtthhcc.t......lhsHusYlINh.u cov pid 81 . 1 . . . . : . 160 1 END4_BACSU/1-2 100.0% 100.0% TTNPSTFELGVDFLRSEIERTAAIGAKQIVLHPGAH-VGAGAEAGIKKIIEGLNEVID-----PNQNVQIALETMAGKGS 2 AAF30715_s/1-2 99.3% 44.6% SSKKNVRELAKEFLIQEIQRTESMGITKLVLHPGSR-LEQNEDIALEQVYTMLNDIFST----INTNVIVCLETMAGKGS 3 END4_MYCPN/1-2 98.2% 37.5% SKDPVKQTFAIDVLTREVKLCHAVGAKLIVLHPGSA-VEQTQTQALDHLIKVLNTVIA-----NTKEVIICLETMAGKGN 4 END4_MYCGE/1-2 98.2% 34.0% SKDPLKQQNAISVLTNEIQLCNLAGAHYLVLHPGSA-VAQTTNEALDNLVKVLNQVIN-----KTKTTVICLETMAGKGN 5 END4_ECOLI/1-2 96.1% 30.2% HPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALD-----KTQGVTAVIENTAGQGS 6 APN1_CAEEL/1-2 95.8% 29.2% SPEAEKLEKSRLAMLDECQRAEKLGITMYNFHPGSTVGKCEKEECMTTIAETIDFVVE-----KTENIILVLETMAGQGN 7 SCAPN1_1_t/1-2 96.8% 27.4% NPDREKAEKSYESFMDDLNRCEQLGIGLYNLHPGST-LKGDHQLQLKQLASYLNKAIK-----ETKFVKIVLENMAGTGN 8 O94604_spt/1-2 96.8% 25.7% NADEQKREQAFNCFVDDLKRCERLGVGLYNFHPGST-ASCTKEEGINNLAECINRAHE-----ETKSVIIVTENMAGQGN 9 O84630_spt/1-2 95.8% 31.0% APNPEILEKTRVCMHQEIADCISLGISFVNFHPGAA-LSDSKESCLDRTIASFSQMAPLFE--NNPPLVVLLETTAGQGS 10 Q9Z7H3_spt/1-2 95.8% 30.0% APDPVILEKSRIGIYQEILDCITLGISFVNFHPGAA-LKSSKEDCMNKIVSSFSQSAPLFD--SSPPLVVLLETTAGQGT 11 Q9WYJ7_spt/1-2 95.4% 30.0% SPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSH-LGTGEEEGIDRIVRGLNEVLNNT-----EGVVILLENVSQKGG 12 O67551_spt/1-2 95.1% 28.4% SPNEELREKSVKVFLEELKFCDEVGIHFYNFHPGTA-KGISDEEGLRNVIKSLEEVFSEY---TPKFTTVLLENTAGERG 13 Q9YA35_spt/1-2 94.0% 16.4% SPDDSVVERSIKRLYDSMIASEWMGSYAVVVHPGYYKGLKSREEAVKRVIEALNRLIESLP--SWVKTPWIAPETMGKQS 14 O27091_spt/1-2 92.6% 16.8% SARKETVEKSIERLFDCAVAAELMGAYRIVFHPGFY-GEHGRSGALGLCIKALDELIERLH-GAGIREFTLAPETTGKRS 15 O59568_spt/1-2 93.3% 15.8% AKEKEKVEASKRRIIQSAERLYEAGGWSVVFHAGYY-LKQPKESVYQKILSALKEIQKELM--DKGIKVWLRPELTGKPT 16 CAB51959_s/1-2 96.1% 27.6% SHTGATVERSVESLRHSLRRGRAIGALGVVVHTGSATGGRERPVALKQVREHMLPLLDELT--HDDDPYLLLESTAGQGA 17 END_MYCLE/1-24 87.6% 26.1% SANSRVRIPSRKILQQTCDAAADIGAAAVVVHGGYVADDNDLEDGFQRWRKALDQLQT--------DVPVYLENTAGGDH 18 Q9YVX5_spt/1-2 91.2% 17.7% SKSHVTISN----LKKEIVYLDTLNVNKCGSIFHLTKIVDSKEKSINTIVSSLEKLSSKLDSLNLNTFNYVIIETSNIVD 19 Q65202_spt/1-2 92.2% 17.7% SRRSAFVTH---FIQQELLICKEVGIKGLVLHLG-----AVEPELIVEGLKKIKPVEG---------VVIYLETPHNKHH 20 Y133_METJA 91.2% 13.0% NEEEKVENSI-RRIIKTAKVLNNCG-KNLVFHPGYY-LKRSKEVTYNRIKSNIQRILDKLEALNL--NVMLRPETTGKTT 21 P95930 91.5% 17.5% SEEKEKIEASKQRILDTADRAELMGADAIAIHIAFY-GKMTPEECYQNVKEGLEEVID------KAREMGIRNVKFGVET consensus/100% t....h.......h.pph.....hs...hs.h.t...........h..hht.h................hhh....t..t consensus/90% s.p..h.p.....hhpph.hh..hGh..hshH.G.h.h..stp.shtphhp.hp.h.t...........hhh.phtstts consensus/80% s.p.thhptuh.hhhpph.hstthGhthhshHsG.h.httspptshpplhpslpphhp.........hhhhh.phsGpts consensus/70% u.ptphhppuhphlhpphphspthGhthlshHPG.h.htpsc-pslpplhpslpplhs.....t...hhhllEshuGpss cov pid 161 . . . 2 . . . . 240 1 END4_BACSU/1-2 100.0% 100.0% ECGR-SFEELAQIIEGVTHNEQ--LSVCFDTCHTHDAGYN----IVEDFDGVLNEFDKIIGID--RIKVLHINDSKNVKG 2 AAF30715_s/1-2 99.3% 44.6% EIGV-NIKQLKTIIDNVHSKKN--IGVCLDTCHMNDSGLI---LDYYNFNQYLKEFDAQIGIN--YIKVLHINDSKNPCG 3 END4_MYCPN/1-2 98.2% 37.5% EIGR-DLDQLKYVINHIEQQER--IGVCLDTCHFHDSGND-----FNNTAEIMETIDTKLGFE--FLKVIHLNESKNVCG 4 END4_MYCGE/1-2 98.2% 34.0% EIGR-DLTELKYVIDRIVDKDR--IGVCLDTCHFHDSGID-----FSDLTGVFNTITTKLGFE--FLKVIHLNESKNNCG 5 END4_ECOLI/1-2 96.1% 30.2% NLGF-KFEHLAAIIDGVEDKSR--VGVCIDTCHAFAAGYD--LRTPAECEKTFADFARTVGFK--YLRGMHLNDAKSTFG 6 APN1_CAEEL/1-2 95.8% 29.2% SIGG-TFEELKFIIDKVKVKSR--VGVCIDTCHIFAGGYD--IRTQKAYEEVMKNFGEVVGWN--YLKAIHINDSKGDVG 7 SCAPN1_1_t/1-2 96.8% 27.4% LVGS-SLVDLKEVIGMIEDKSR--IGVCIDTCHTFAAGYD--ISTTETFNNFWKEFNDVIGFK--YLSAVHLNDSKAPLG 8 O94604_spt/1-2 96.8% 25.7% CLGG-TFDDFAALKSKIKNLDR--WRVCLDTCHTFAAGYD--IRTEESYKKVIDEFDEKVGAK--YVSGWHLNDSKAPLG 9 O84630_spt/1-2 95.8% 31.0% LIGS-SFEELAYLIQGIKAHIP--IGVCLDTCHIFAAGYD--ISSVAGWEQVLKHFDAVIGLS--FLRAIHLNDSVFALG 10 Q9Z7H3_spt/1-2 95.8% 30.0% LIGS-NFEELGYLVQNLKNQIP--IGVCVDTCHIFAAGYD--ITSPQGWEDVLNEFDEYVGLS--YLRAFHLNDSMFPLG 11 Q9WYJ7_spt/1-2 95.4% 30.0% NIGY-KLEQLKKIRDLVDQRDR--VAITYDTCHGFDSGYD--ITKKEGVEALLNEIESLFGLE--RLKMIHLNDSKYPLG 12 O67551_spt/1-2 95.1% 28.4% DLGK-NFKELKEIMNVFRG-IK--LGVCLDTCHAFAYGYE--INTKEGFENFKREIEKMVGLE--SVKAVHANDSKVPLG 13 Q9YA35_spt/1-2 94.0% 16.4% QVG-----SLEETVEICLNTPR--CRPCVDWAHLYARAEGKFVTSVDQVVKAIEYIESNLGRE--AVDPLHTHFSKIEYG 14 O27091_spt/1-2 92.6% 16.8% QVG-----SLDEIIKLSEEFDE--VMPTIDFAHIHARGGG-CIRDASSYRGILERIESRLG-----SHHLHCHFTGIEYT 15 O59568_spt/1-2 93.3% 15.8% QFG-----DLKELVKLSQELEL--VLPAIDFAHAHARNKG-KCNTEEEWREMLALIENELGRE--ALDNMHIHISGIEYG 16 CAB51959_s/1-2 96.1% 27.6% SLCS-RTWDFGPYFEALDAHPK--LGVCLDTCHIFAAGHD--LTGPSGMHQTLDLLVDTVGEG--RLRLIHANDSKDVAG 17 END_MYCLE/1-24 87.6% 26.1% AMAR-RFDTIARLWDVIGETG---IGFCLDTCHAWAAG--------EGLIHVVDRIKAITG----RIDLVHCNDSKDEAG 18 Q9YVX5_spt/1-2 91.2% 17.7% HIGS-TIEDLALIYNKLSSHTKNRVRFCIDTAHIFNTYYA--INTVKGIVDYLIKFDVLIGLN--KVVAIHLNDSEGMPL 19 Q65202_spt/1-2 92.2% 17.7% TYKYSTMEQIKELFLRIRNTRLKQIGLCIDTAHIWSSGVN--ISSYNDAGQWLRSLENIHSVIPPSHIMFHLNDAATECG 20 Y133_METJA 91.2% 13.0% QFG-----DIDETLKLCFELN---ILPCIDFSHIYARSRG-VINDYNSFYKILEKVENVLGKE--AIKDMHIHLSGIEYG 21 P95930 91.5% 17.5% MAKETAFGTLDEVISISKELKG--VIPYIDWAHTFARQGG-----EIDYGKIIDRLIKELGLT---HINSHFESLVYRRG consensus/100% .ht.....pht.hh..........h..hhDhsHh.s...........th.thh..h...hu.........Hhp......h consensus/90% .hs.....plt.hhph..t.....lh.slDhsHhasts.t......tth.thht.htt.hG.....h..hHhp.uh..hG consensus/80% thG..th.plt.lhphhpph....ltsClDhsHhastuhs......pshtphhpphpphlGhp..hlphhHhppSt..hG consensus/70% plG..phtpLt.lhphlppppt..ltsClDTsHhausGhs..hps.pshtphlpphcphlGhp..hlcshHlN-St..hG cov pid 241 : . . . . 3 .] 311 1 END4_BACSU/1-2 100.0% 100.0% ARKDR-HENIGFGEI--------GFDALQYVVHHEQLKDIPKILETPYVGEDKKNKKPPYRFEIEMLKEKQ 2 AAF30715_s/1-2 99.3% 44.6% ANKDR-HENLGYGTI--------GFANLINIIYHPLLNNIPKILETPWFNVN-DELIPLYKHEIKMIRDCK 3 END4_MYCPN/1-2 98.2% 37.5% SKKDR-HANLGEGMI--------GFDNLMRFIAQPQIKQIPIVLETPSDKHN---YPAVYGAEIERIRAWF 4 END4_MYCGE/1-2 98.2% 34.0% SKKDR-HANINAGMI--------GFENLMKFISHPQIKDLPIILETPSTSLN---YPTIYREEISQIRSWF 5 END4_ECOLI/1-2 96.1% 30.2% SRVDR-HHSLGEGNI--------GHDAFRWIMQDDRFDGIPLILETINPD--------IWAEEIAWLKAQQ 6 APN1_CAEEL/1-2 95.8% 29.2% SKLDR-HEHIGQGKI--------GKAAFELLMNDNRLDGIPMILETPEG---------KYPEEMMIMYNMD 7 SCAPN1_1_t/1-2 96.8% 27.4% SNRDL-HERLGQGYL--------GIDVFRMIAHSEYLQGIPIVLETPYENDE------GYGNEIKLMEWLE 8 O94604_spt/1-2 96.8% 25.7% SNRDL-HENIGLGFL--------GLEPFRLIMNDSRWDGIPLVLETPAKSPE------QWKKEVELLRFMV 9 O84630_spt/1-2 95.8% 31.0% KNKDR-HAPIGEGCI--------GSDSFCFLMQDERTRMLPKYLETPGG-PD------LWTKEIRYLQKVC 10 Q9Z7H3_spt/1-2 95.8% 30.0% ANKDR-HAPLGEGYI--------GKESFKFLMTDERTRKIPKYLETPGG-PE------NWQKEIGELLKFS 11 Q9WYJ7_spt/1-2 95.4% 30.0% AAKDR-HERIGSGFI--------GEEGFAVFFSFKEIQEVPWILETPGG-NE------EHAEDIKKVFEII 12 O67551_spt/1-2 95.1% 28.4% GRKDR-HEHIGKGYI--------GLEGFKNLLKDEYFSTLPYYIETPKE-NN------MDPVNLSVLREIY 13 Q9YA35_spt/1-2 94.0% 16.4% KGGERMHHTLREEGY--------GPDWRIVCRAYKETGINAVVISESP----------ILEKDALLMKSIC 14 O27091_spt/1-2 92.6% 16.8% DAGERKHHSLS-EGY--------GPPIEPLIEVLVDGGWDATIISETP----------MKDTDARKIKGII 15 O59568_spt/1-2 93.3% 15.8% EKGEKRHLNLE--ES--------DLKWEDLLKVLKEFRVKGVIISESP----------NIEGDAILMKKKW 16 CAB51959_s/1-2 96.1% 27.6% AHKDR-HENIGAGHI--------GEDPFRALMTHPATDGVPLVIETPGGKEG-------HAADVARLKKLR 17 END_MYCLE/1-24 87.6% 26.1% SGRDR-HANLGS-----------GQIDAELLVAAVKVAGAPVICETAEE---------GRKDDIAFLREKT 18 Q9YVX5_spt/1-2 91.2% 17.7% SSIRP-HISITEGKIFYDY--KSKLSPLHIIKLFSLYYNIPCILERKTITDDLS----EINKEIKIFNNLN 19 Q65202_spt/1-2 92.2% 17.7% SGIDR-HASLFEGMIWKSYSHKIKKSGLYCFVEYITRHQCPAILERNLG--------SSMQLQTALTAEFT 20 Y133_METJA 91.2% 13.0% KGGERRHLPLN--ES--------NFNYRDVLKALKDFDASGTVICESP----------MLEYDAVLLMKCY 21 P95930 91.5% 17.5% KYVDE-HIPIDANAP--------PFEPLAKELLKRDIS-ITLICESPE-----------LERDALKMKEVL consensus/100% t.hc..H..l..........................h...shhhpp................ph..h.... consensus/90% tth-h.H..lt............s.t.h.hhh....ht..shhlpps............ht.-h.hh.th. consensus/80% tth-+.Htsls.t.h........s.psh.hhh...thp.hshllEps............htt-h.hhtth. consensus/70% uttDR.HtslstGhl........Ghpshthlht..phptlPhllEos............htt-hthhpphh