cov pid 1 [ . . . . : . . . 80 1 338187.VIBHAR_02472_from_117_to_476 100.0% 100.0% GGEIDVQYELVTDRSYFVRPLSYLAHYLGYAWVGGNNSQYVGEDMKIDRVGDG-WVIQGNNNGS---CSGYRCGEKTKIT 2 380703.AHA_0438_from_119_to_477 98.1% 55.7% GDEVDVQWRLVHDSANFIKPTSYLAHYLGYAWVGGNHSQYVGEDMDVTRDGDG-WVIRGNNDGG---CEGYRCGEKTAIK 3 338187.VIBHAR_02474_from_117_to_475 97.8% 52.0% GSTTEIEHNLVASDENFVRPISYLAHTLGYAWLSGNQGKFVGDDMVVNRVNGS-WEIQGNSDGS---CNGDRCDEKTKIT 4 349521.HCH_03563_from_44_to_411 96.7% 29.5% QDIAALKDTIVRDPD-FYVPLTYLAHFLGYGWCGGTASQNVGEDFSITRNGDQQYTLQANYNGSDPYSGGYWADKRLKMS 5 325240.Sbal_1565_from_44_to_411 96.4% 26.8% PDLDSLKNDAINDPS-FISSLFSLGHHLGYAWAGGTASQYVGEDIEVRRESSNEYSLKARYNGNDPYESGYRANERLKVN consensus/100% .s..tlp.phlts.t.Fh.sh..LuHhLGYuWhuGstup.VG-Dh.lpR.sst.a.lpup.sGs...ptG.hssc+hthp consensus/90% .s..tlp.phlts.t.Fh.sh..LuHhLGYuWhuGstup.VG-Dh.lpR.sst.a.lpup.sGs...ptG.hssc+hthp consensus/80% ss.sslp.plVpDss.FlpPloYLAHaLGYAWsGGstSQaVGEDhplsRsuss.aslpuN.sGu...ssGYRssE+hKls consensus/70% ss.sslp.plVpDss.FlpPloYLAHaLGYAWsGGstSQaVGEDhplsRsuss.aslpuN.sGu...ssGYRssE+hKls cov pid 81 . 1 . . . . : . 160 1 338187.VIBHAR_02472_from_117_to_476 100.0% 100.0% VNNFAYTLNDKNFWHGEVIESERELVDTVWATARNYSNTPQQ-IVVDLKLTESTNWSKTNSYGFAQQVKTENEFKW--PL 2 380703.AHA_0438_from_119_to_477 98.1% 55.7% VSNFAYNLDPDSFKHGDVTQSDRQLVKTVVGWAINDSDTPQSGYDVTLRYDTATNWSKTNTYGLSEKVTTKNKFKW--PL 3 338187.VIBHAR_02474_from_117_to_475 97.8% 52.0% IQDFAYHLNPKHFSRSDVTESTKEKLTTITAYAINTQDRPKH-INVQFDVDQSTSWYKTDHSVFAQSVYISDAFQW--PK 4 349521.HCH_03563_from_44_to_411 96.7% 29.5% LSDLKFYTNPGSLKLGDPQVYDREPLKTITAVVYNRGDTEDT-AVATLQYDETKSWSKQEDYSFSETISIKNTYEFDLKI 5 325240.Sbal_1565_from_44_to_411 96.4% 26.8% LQNIHFVTNPQSLKLGSPQVYDREAIYTAPVVIYNWGDTEDT-GVATLNYDYTTSWAKTDNFSFSEKIGVTNKYEVGIPG consensus/100% lpshta.hsstph.hups...p+p.l.Th.shhhN.tsp.pp.hssphphs.spsW.Kppp.shuppl.hpstaph...h consensus/90% lpshta.hsstph.hups...p+p.l.Th.shhhN.tsp.pp.hssphphs.spsW.Kppp.shuppl.hpstaph...h consensus/80% lpshtahhNPpshphG-sp..-REhlpTlsuhshNhuDT.pp.hsssLphDpoTsWuKTssauFupplthpNpaca..Ph consensus/70% lpshtahhNPpshphG-sp..-REhlpTlsuhshNhuDT.pp.hsssLphDpoTsWuKTssauFupplthpNpaca..Ph cov pid 161 . . . 2 . . . . 240 1 338187.VIBHAR_02472_from_117_to_476 100.0% 100.0% VG--KTKLSITFDANQSFSNSNGASTSKDVTLQARPMVPANSELPVRIELYRSTISYPYRFNADISYDVNFNGFLRWSGN 2 380703.AHA_0438_from_119_to_477 98.1% 55.7% VG--ETELSIEIAANQSWASQNGGSTTTSLSQSVRPTVPARSKIPVKIELYKADISYPYEFKADVSYDLTLSGFLRWGGN 3 338187.VIBHAR_02474_from_117_to_475 97.8% 52.0% IG--NTHPNVSVDANQLFSDFNSGTSTSSANREANLTIPAHSILPIQIELYRSHILYPFRIRTDISYRVRFDGFLRHSGN 4 349521.HCH_03563_from_44_to_411 96.7% 29.5% FGG-STEITAGFTANQGWSESNGNSETVTQSAQYRALMPANSKRIITLTVFKQKADIPYESEMVLGYNVAMENFLRWGGN 5 325240.Sbal_1565_from_44_to_411 96.4% 26.8% IGGASSEISAEFSASQGWSETDGKSTTISSQAQYRAIMPPRSKRYISITLFKQKADVPYTSSLYMMYDIKYENFLKWGGN consensus/100% hG..poc.shthsAsQ.aup.sutopo.s.p.php.hhPspS.h.lplpla+tph.hPap.ph.h.YplthpsFL+auGN consensus/90% hG..poc.shthsAsQ.aup.sutopo.s.p.php.hhPspS.h.lplpla+tph.hPap.ph.h.YplthpsFL+auGN consensus/80% lG..pTclohphsANQuaSppNGsSoTho.stphRshhPApSch.lpIpLa+pchshPYc.phsluYclphpsFLRWuGN consensus/70% lG..pTclohphsANQuaSppNGsSoTho.stphRshhPApSch.lpIpLa+pchshPYc.phsluYclphpsFLRWuGN cov pid 241 : . . . . 3 . . 320 1 338187.VIBHAR_02472_from_117_to_476 100.0% 100.0% AWHTHPDNRPYRSHTFTMGRGSEQ--SADIRYQWDHRYIPGEVKWWDWSWAIRE-AGLGSMQYATGASL-RPFHSYVSGD 2 380703.AHA_0438_from_119_to_477 98.1% 55.7% AWYTHPDNRPNWNHTFVIGPYKDK--ASSIRYQWDKRYIPGEVKWWDWNWTIQQ-NGLSTMQNNLARVL-RPVRAGITGD 3 338187.VIBHAR_02474_from_117_to_475 97.8% 52.0% AWHTHPENRPTTSHMFTMGRASEL--SENIRYQWDHRYIPGETKWWDWSWAIHT-HGLALMQYAAGESL-RPYHSHVSGT 4 349521.HCH_03563_from_44_to_411 96.7% 29.5% ARNDHPTDRPWENYTFGA--RNNLNGAEDILDQYAHRSIQNYGQ-WDWNWMLNE-YGAGGVKWAVGNISKRRFIAPLTGK 5 325240.Sbal_1565_from_44_to_411 96.4% 26.8% AHINHPTNRPNFPYTFGGANANNLNGPEALVDQYLHQDINGYGV-WDWPAAISSAQSKSGFEWQLANIV-RQHGAPISGK consensus/100% Ah.sHPpsRP..sahFsh..hpp...stslh.Qa.+p.I.s.s..WDWshhlpp..uhu.hp.thut...R.hhu.loGp consensus/90% Ah.sHPpsRP..sahFsh..hpp...stslh.Qa.+p.I.s.s..WDWshhlpp..uhu.hp.thut...R.hhu.loGp consensus/80% AahsHPsNRP.hsaTFshu.tsph..upsIh.QasHR.IsG.sp.WDWsWsIpp.tGhushpashup.l.R.atu.loGc consensus/70% AahsHPsNRP.hsaTFshu.tsph..upsIh.QasHR.IsG.sp.WDWsWsIpp.tGhushpashup.l.R.atu.loGc cov pid 321 . . : . . . ] 387 1 338187.VIBHAR_02472_from_117_to_476 100.0% 100.0% FYA--ESQYAGTIEIGQ----PSPLGL-----RARSTDTLSGGTTQ---RVGDVEVTTNFDASKLSA 2 380703.AHA_0438_from_119_to_477 98.1% 55.7% FSA--ESQFAGNIEIGA----PVPLAADSKVRRTRSVDGAGQG----------LRLEIPLDAQELSG 3 338187.VIBHAR_02474_from_117_to_475 97.8% 52.0% FEA--ESQYAGMIDVGQELTVDAPLHW-------------AEGSTPQQIQVGNVTVLTDFDARSLEQ 4 349521.HCH_03563_from_44_to_411 96.7% 29.5% FTTVDGSQF--NIDASA----PISLDGDEMQMAQQSARTKRSLGGNLEMEIVRV------DDYSYDD 5 325240.Sbal_1565_from_44_to_411 96.4% 26.8% FTAIDSSQF--NIDASE----SYPLTDEDIANRPKSAQ-KLGLSRNIQVAVGEI------QN--NDE consensus/100% F.s..tSQa...I-hut....s.sLt...............th..........l......ps...pt consensus/90% F.s..tSQa...I-hut....s.sLt...............th..........l......ps...pt consensus/80% FpA..pSQa..sI-hut....shPLsh.....t.pSsp.htthst....tlspl......Ds.phst consensus/70% FpA..pSQa..sI-hut....shPLsh.....t.pSsp.htthst....tlspl......Ds.phst