cov pid 1 [ . . . . : . . . 80 1 AGRB_BACHD/4-18 100.0% 100.0% -RLALTLAH-QVKAL-NAE---ETESVEVLTFGFTIILHYLFTLLLVLAVGLLHGEIWLFLQIALSFTFMRVLTGGAHLD 2 Q8RC75_THETN/8-0 91.5% 18.2% -KLSQRIVQ-KVFKG-QNL---SEIELAKIEYGLSLVLGVLIEFILIFFVGFLLGVGYYVAVIMISSLFLRIGTGGAHCS 3 AGRB_CLOBE/4-18 100.0% 19.1% -YLSTNISL-YFQENNSCL---SKKDVLKIQYTLEAILSDLSKFIIIFLVFLFIKEIPLFLFSFIILNSTRPLLGGIHCK 4 FSRB_ENTFA/1-18 98.9% 18.2% -MLIDWILK-NIMDMDQED---QSGKTQWTKYYLTVYFSGLFNLLMILILSVLFGTLSETFIVYVVLIFLRPVAGGWHAK 5 AGRB2_CLOPE/4-2 100.0% 19.4% -NISKLIAE-KVSSE-LNY---DNERKEIIQYGTYALIQTLISIISVLILGLVFNIALEALIFLFTASILRKYSGGAHSE 6 AGRB_LACPL/12-1 99.4% 18.4% -KLSDRLFA-AIQKN-LQL---ERRQALLVKLGIDTVLNVIPKLIITIILALLLHELVPVLVFMGSFLVLRGFAYGRHLE 7 AGRB1_CLOPE/3-1 100.0% 14.7% -KFLKSAIE-YLAKD-LDL---DKELLEQIQYVVIVLTFEFIKCISVILIAGILGYFKESLIVILSMCFIKPFIGGYHED 8 Q4CK48_CLOTM/5-0 100.0% 14.9% KKLCENITN-VIKERVKDI---DDEKAEIINYGLYLWIADIIKLAIIFTAACLLRVFKLAVVFVVCFGLLRIFAGGSHAK 9 Q9F1U3_STAAU/6-0 98.9% 15.2% -NKIDQFAT-YLQKR-NNL---DHIQFLQVRLGMQVLAKNIGKLIVMYTIAYILNIFIFTLITNISFYLIRRYAHGAHAP 10 Q9F1U6_STAAU/6-0 98.9% 21.2% -NKIDQFAT-YLQKR-NNL---DHIQFLQVRLGMQIIVGNFLKILVTYSISIFLSVFLYTLVTHLSYMLIRYNAHGAHAK 11 Q49YZ1_STASA/7-0 98.9% 21.2% -AKIDNFAK-QLQQR-NNL---DRIEYLKMRLGMQVVVNNFFKTIVIYGVSLLCHMFLYTLTVHLTFFFIRHFAHGAHAK 12 Q4L7S0_STAHJ/6-0 98.9% 19.6% -NKIEQFAL-YLQRK-NNL---DHIQFLKVRLGLQVVVSNLAKTIVTYGVALIFHTFLYTLFTHVSYFLVRRYAHGAHAK 13 AGRB_STAEP/6-18 98.9% 15.8% -KKIEQFAQ-YLQRK-NNL---DHIQFLKIRLGMQVLAINIEKSIVVYGLAIIFHTFFYTLLTHLSYFLIRRHAHGTHAN 14 AGRB_CLOAB/10-1 100.0% 21.2% -KLAEVVSL-KLNKH-LKM---EGIELIKLKLGVEIIFINISKLAILFLVSYYFGLIKETIIMLAAFGFLRSNAFGLHAK 15 AGRB_LISIN/9-19 100.0% 19.4% -PLSERMADVLISKDRWKD---DEEGYLKVKYGLEIILINVMKFAIVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHAT 16 Q4MQT8_BACCE/10-0 100.0% 20.2% -NLTEEIAS-KIALWANNNCKGGQIEYLKMKLGLETILINFSKAIFVYGMAILCGVLFQTFILHSAYFAVRRVSFGLHAK consensus/100% ..h...h....h.....t....tt..h..hphhh.hhh..h.p.h.hh.h.hhht.h...h........h+...hG.H.. consensus/90% ..h.p.h....l.t...p....pp.th..hphsh.hhh..h.phh.hhhhuhhht.h..hhhhhhsh.hhR...hGhH.p consensus/80% .th.cphst.hltpt..p....pp.ph.hlphGhphlh.sh.chlhhhhluhlhthhh.slhhhhshhhlR.hshGhHsp consensus/70% .ph.cphsp.hlpcp..sh...-p.ph.hlphGhpllh.sl.Khlllhhluhlhthhh.slhhhlshhhlRhhutGhHsc cov pid 81 . 1 . . . . : . 160 1 AGRB_BACHD/4-18 100.0% 100.0% HSIGCTLLSVLFITAISWVPF---------ANNYAWILYGISGG--LLIWKYAPYYEAHQVVHTEHWERRKKRIAYILIV 2 Q8RC75_THETN/8-0 91.5% 18.2% TYRRCVTFTGIYFLPFSFVAK-----FVDAHNLPLLELVIGIALIFVVLGIML-------------LMKKIKFFMGILVL 3 AGRB_CLOBE/4-18 100.0% 19.1% TYYGCLTCSILYFMIILLFTR-----LFPELNTNFYIVFFILSL--AITFIFAPCPNEKRPVKNKATLKILSLISLTFWI 4 FSRB_ENTFA/1-18 98.9% 18.2% TKWLCRLESIVIYVAIPFVLK-----NSS-VSLPFIYKILLMCLLVVLFYWYAPQGTAIEPVQPSDL-NVLKKQSLIRVC 5 AGRB2_CLOPE/4-2 100.0% 19.4% SSNVCTLLGIIISICIGFLIKSSFFAKMN-FELVVFIGIVIFVFGYFIVFKFAPVDTKNKPIKTEKKKKRMKKGSLKILT 6 AGRB_LACPL/12-1 99.4% 18.4% SDLLCTILTAVTFVGVPYLIQ-----FTDGIPELFRFILCLLLT--VPIGMFSPAVTRKNPIKSQSLKRALKHKAIITSL 7 AGRB1_CLOPE/3-1 100.0% 14.7% SQLKCFIATLIITTSIIMLVT-----FNK-LNLFSIVILNLFSI--FSIYNKAPVIDSRFPLTKEHLIKKNKILSVTNSS 8 Q4CK48_CLOTM/5-0 100.0% 14.9% TFWGCLLTNSAITFGSVYLSL-----LLS-SIKPIFLFMLVMPFCAVVLYLYAPADHENKPVVSKKQKRKLKIVAYMVLI 9 Q9F1U3_STAAU/6-0 98.9% 15.2% SSFWCYVESITLFIVLPLLVL-----HFH-INETLMMFLALISV--GVVIKYAPAATKKKP-IPARLVKQKRYFSIIIST 10 Q9F1U6_STAAU/6-0 98.9% 21.2% SSILCYIQSILTICILPSFSI-----NID-INFTYLLALSIIGL--ISVVIYAPAATKKQP-IPIKLVKRKKYVSIIMYL 11 Q49YZ1_STASA/7-0 98.9% 21.2% NSLLCYIQSVIYFVLLPWIVG-----YVQ-VSSLIMYTLALVGL--IIISIYAPSATKKQP-IPERLRRGKKIKAICLTL 12 Q4L7S0_STAHJ/6-0 98.9% 19.6% SSLLCHVQNLALFVALPWLLV-----YFQ-VNLGIMYSVVAIGT--VLIIYYAPSATKKQP-IPSHLKMKKKLLSIIITM 13 AGRB_STAEP/6-18 98.9% 15.8% SSLLCHIQNIIFFIIFPYLII-----KLD-INYFVLLSMALVGL--IITILYAPAATKKQP-IPRRLVKRKKILSIFLYC 14 AGRB_CLOAB/10-1 100.0% 21.2% NSIVCTVMSLLMFVLGAYLSK-----YLL-FNNYMVLASFIIVN--LLLFRYAPGDTEAHPLVGAKLRDKLKKQAVLMGM 15 AGRB_LISIN/9-19 100.0% 19.4% KTLNCTLISLTMFVLAPFIFQ-----NIP-SNNWIVLGTFAFIL--LNMFLFAPADTESLPLIGEEHRKKLKRKAMIGTL 16 Q4MQT8_BACCE/10-0 100.0% 20.2% SSAHCTIISVILLVGMSLIAP-----YIV-LSNYSILGLSLIFI--LCLYRYAPADTEKNPLIGLDRRRKLRKEAIVTCL consensus/100% p...Chh.s.hh.h....h................h....h.....h.h..h...................ph..hh... consensus/90% p.hhChh.shhhhh.h.hh................hh.h.hh.h..h.hhhhuP..pt..s....th.phh+h.uhhh.h consensus/80% sphhChl.slhhhhhhshl.h......h..hs..hhhhhhlhsh..h.hhhaAPssspppP.hstchh+thKhhuhhhhh consensus/70% ophhChl.ollhhhhhshlhh.....hh..hs.hhhhhhhlhsh..lhlhhaAPssscppP.hstchh+phKhhulhhhh cov pid 161 . . . 2 ] 209 1 AGRB_BACHD/4-18 100.0% 100.0% LFIILAMLMSTQ--------------GLVLGVLLQGVLLTPIGLKVTR- 2 Q8RC75_THETN/8-0 91.5% 18.2% ETIVFVLFSERAFFAS------------SIGLFLQSVMTTAFGERLVN- 3 AGRB_CLOBE/4-18 100.0% 19.1% ILFYLSPLQTRN--------------CILISIFLQIIQVIIINTKGVIF 4 FSRB_ENTFA/1-18 98.9% 18.2% LLILCSLFVK-EKIAS----------VILYGLVIQGLMILPVTKNLIE- 5 AGRB2_CLOPE/4-2 100.0% 19.4% IYLFIEVLSIILYYNSGWSLAKPVMLSIIFGVAWQCMTLTYIGNILLK- 6 AGRB_LACPL/12-1 99.4% 18.4% VFSFLQFLVS-NNLGT----------IIVVSLLLVFTLIVPLKGGKSD- 7 AGRB1_CLOPE/3-1 100.0% 14.7% ILFLITLIFFKISWIS----------QTITWTLLIQTLLLFNKYKRED- 8 Q4CK48_CLOTM/5-0 100.0% 14.9% AEYLISLSITQNTFSN----------VIILSTLFVCLGMLPVTYKIMG- 9 Q9F1U3_STAAU/6-0 98.9% 15.2% ILFIITLFVK-EPYTQ----------FIQLGIIIQAITLLPIYYSKED- 10 Q9F1U6_STAAU/6-0 98.9% 21.2% LVMILSLIIH-PFYAQ----------FMLLGILVESITLLPIFFPKED- 11 Q49YZ1_STASA/7-0 98.9% 21.2% IFLLISLFLN-EPYQQ----------LMLLGIVIISILQFPIFFPKED- 12 Q4L7S0_STAHJ/6-0 98.9% 19.6% VLLIISFLAP-EPFKQ----------LILLGITLESITLLPIFFPRED- 13 AGRB_STAEP/6-18 98.9% 15.8% TIVVISLVTK-EPVNK----------LILFGVILESLTLLPIFFPKED- 14 AGRB_CLOAB/10-1 100.0% 21.2% LLMAITLIIPDELIKT----------CISLSSYFEIISILPITYKVLG- 15 AGRB_LISIN/9-19 100.0% 19.4% ILTGIALLIPFAEMKT----------LIMVGSLFQVISINPLTYKLLK- 16 Q4MQT8_BACCE/10-0 100.0% 20.2% FIIFIALIVPNQMIKS----------LLVLGIALQIMFILPITYKLLK- consensus/100% ...hh........................h..hh..h........h... consensus/90% hhhhhthh...................h.hu.hh..h.hh.hh..h.t. consensus/80% hhhhlshhh..t.htp..........hhhhuhhh..hhlhslhh.h.p. consensus/70% lhhhlslhh..t.htp..........hlllulhlp.lhlhPlhh.h.c.