Family alignment for the AgrD domain, displayed in

                       cov    pid  1 [        .         .         .         .     ] 46
 1 Q8VT09_9STAP/1-0 100.0% 100.0%    -MKLVNLLLSSTTSFLQMVGNRQKAKTCTVLYDEPEVPKELTQELE   
 2 O33589_STAAU/2-0 100.0%  42.2%    -KKLLNKVIELLVDFFNSIGYRAAYINCDFLLDEAEVPKELTQLHE   
 3 Q8VSW6_STALU/2-0 100.0%  28.9%    -NLLSGLFTKGISVIFEFIGNFSVQDMCNGYFDEPEVPQELIDLHR   
 4 Q8VSX9_STAIN/1-0 100.0%  33.3%    -MRILEVLFNLITNLFQSIGTFARIPTSTGFFDEPEIPAELLEEEK   
 5 Q8VSX6_STAEP/2-0 100.0%  40.0%    -NLLGGLLLKIFSNFMAVIGNASKYNPCSNYLDEPQVPEELTKLDE   
 6 Q4L7S1_STAHJ/1-0  97.8%  40.0%    MTVLVDLIIKLFTFLLQSIGTIASFTPCTTYFDEPEVPEELTNAK-   
 7 Q9L561_STAAU/2-0 100.0%  40.0%    -NTLLNIFFDFITGVLKNIGNVASYSTCYFIMDEVEIPKELTQLHE   
 8 Q9F1U5_STAAU/2-0 100.0%  37.8%    -NTLVNMFFDFIIKLAKAIGIVGGVNACSGLFDEPKVPKELTQLHE   
 9 Q8VT03_STACP/4-0 100.0%  37.8%    -NSLFNLIFKFFTVIFEFIGFVAGANPCQLYYDEPEVPEELSKLYE   
10 O86860_STAEP/2-0 100.0%  35.6%    -ENIFNLFIKFFTTILEFIGTVAGDSVCASYFDEPEVPEELTKLYE   
11 Q8VT12_9STAP/1-0 100.0%  37.8%    -MNLLNSFFSFFAKFFELIGTVAGVNPCGGWFDEPEVPEELTKLSE   
12 Q68VB9_STASA/9-0 100.0%  22.2%    -KSISKSISNYFAKVFASIGSISTINPCFGYTDESEIPKELTDLYG   
13 Q8VSY5_9STAP/1-0 100.0%  35.6%    -MNIFESILTVFAKFFAFIGTISSVKPCTGFADEPEIPKELTDLYK   
14 Q8VSY2_STAGA/1-0 100.0%  35.6%    -MNILDSLLNLATKFFSALGASVGARPCGGFFDEPEVPAEITELHK   
15 Q8VSY8_9STAP/1-0 100.0%  31.1%    -MHIFESIINLFVKFFSVLGAVSGGKVCSAYFDEPEVPKEITDLYK   
16 Q8VSW3_STAXY/1-0 100.0%  35.6%    -MNIFESILNLFAKFFSVLGVMAGAKPCGGFFDEPEVPSEITKLYE   
17 Q8VSZ1_STACA/1-0 100.0%  33.3%    -MDILNGIFKFFAFIFEQIGNIAKYNPCVGYFDEPEVPSELLDEQK   
18 Q8VSX1_STASI/1-0 100.0%  35.6%    -MDLLNGIFKLFAFIFEKIGNLAKYNPCLGFLDEPTVPKELLEEDK   
19 Q8VSW9_STASI/1-0 100.0%  33.3%    -MELLNGIFKLFAFIFEKIGNLAKYYPCFGYFDESEVPQELLDEDK   
20 Q8VSZ7_9STAP/2-0 100.0%  37.8%    -MQIINLLFKVITAVFEKIGFIAGYSTCSYYFDEPEVPKELLEIYK   
21 Q8VSZ4_9STAP/4-0 100.0%  33.3%    -MQIFDLLFKVISFIFEKIGFLAGYRTCNTYFDEPEVPKELFETYQ   
   consensus/100%                    ...l.t.h.p.h..hht.lG.......s..hhDEsplPtEl.p...   
   consensus/90%                     ...lhp.hhphhs.hht.lG.huth.sC.hhhDEsclPpElhp..p   
   consensus/80%                     ..plhp.hhphhshhhp.IG.huthpsC.sahDEPEVPpELhp..c   
   consensus/70%                     .hplhshlhphhshhFphIGshushpsCssaaDEPEVPcELhchhc