cov pid 1 [ . . . . : . . . 80 1 4896.SPCC1223.13-1_from_631_to_825 100.0% 100.0% MSIRHGDCVCLFNRYRAQHNNALFLGTSNVQRAISKVSLNMKYNSNYFPTTDAPNDAENEGAGLAMANNLWEPFYIFSV- 2 10090.ENSMUSP00000017151_from_205_to_357 73.3% 16.6% LCISSGSKVSLFNRLRSQTVSTRYLSVEDG--------------------------------AFVASARQWAAFTLHL-- 3 9986.ENSOCUP00000011572_from_147_to_299 72.8% 16.5% LCIASGTKVALFNRLRSQTVSTRYLHVEGG--------------------------------NFHASSQQWGAFYIHL-P 4 214684.CNA01890_from_397_to_554 66.2% 8.9% ICFPRDSVFSLWTRIHGQTVRTKWMNLEANFNGHGPR--------------------------LTSRTAKWTPFRFEVL- 5 99883.ENSTNIP00000007897_from_137_to_284 72.8% 17.2% REISSCSRVALFNRLRSQTVSTRYLSVDRG--------------------------------AFIVSARQWTAFTITAL- 6 7955.ENSDARP00000104008_from_156_to_305 72.8% 17.2% LCISSGSKVSLFNRLRSQTVSTRYLAVEDG--------------------------------AFVASARQWTAFTVNL-- 7 7739.JGI242509_from_149_to_298 72.8% 16.7% LCIPSGSRVALFNRLRSQTVSTRYLHVESG--------------------------------NFHASSQEWGAFTIHL-- 8 7425.XP_001600894_from_167_to_316 72.8% 16.3% LCIASGTTVALFNRLRSQTVSTRYLHVNGD--------------------------------QFHASSTQWSTFTIYL-- 9 31234.CRE27979_from_214_to_370 76.4% 19.2% LCIASGTKVALFNRLRSQTVSTRYLHVEGG--------------------------------AFHASSTKWGAFTIHLF- 10 28377.ENSACAP00000012194_from_155_to_305 73.3% 17.2% LCISSGSKVSLFNRLRSQTVSTRYLSVEGE--------------------------------TFTASARQWAAFTLYL-- 11 135651.CBN08231_from_160_to_312 74.4% 19.2% LCITSGMKIALFNRPRTQTVSTRYLHVKRY--------------------------------AFQASSTKWGAFTIHTV- 12 135651.CBN18395_from_170_to_328 77.9% 16.3% QCIASGTKVAFFNRPRSQTVRTRYLHVEEN------------------------SSSTPHQLKFHASSTKWGAFTIHLF- 13 135651.CBN24462_from_179_to_331 74.4% 17.2% MYITSGTNVALFNRPHSQRFRTRYLHFEGN--------------------------------DFQASSTKWGAFTIHLL- 14 6085.XP_002162622_from_212_to_361 72.8% 15.8% LCISSNSNVALFNRLRSQTVSTRYLHVEND--------------------------------NFIASSLQWGFLSIHL-- 15 135651.CBN14524_from_432_to_582 74.4% 17.7% KYIASGTNVAIFHRPRSQRLRTRYLNVEED--------------------------------AFQASSTKWSVFTIYLF- 16 51511.ENSCSAVP00000002376_from_187_to_365 72.8% 15.9% LCIPSGSKVSLFNRLRSQTVSTRYLHVNKD--------------------------------GYRASASQWGAFAIHL-- 17 9258.ENSOANP00000026593_from_12_to_164 73.8% 13.4% VCISSGSKVSLFNRLRSQTVSTRYLSVEGG--------------------------------AFIASARQWAAFTLHL-- 18 104341.JGI128774_from_289_to_440 72.3% 13.9% SCILAGGPVSLFNRINSQTVRTKYMTVDSG--------------------------------QLCASNVAWSAFNVNVV- 19 29883.JGI300968_from_247_to_400 64.1% 12.9% SCILAGGPVSLFNRINSQTVRTKYMTIDHA--------------------------------QLCASNVAWSAFNVNVV- 20 104341.JGI119714_from_507_to_834 94.9% 10.9% LCINHGSTISLFHRLRSQTVSTKYLCVSGSGSSFKGSDGMPLMGLDQRVRTQTP--------SFIARTASWDPFIMYIVD 21 4896.SPCC736.08-1_from_305_to_446 68.7% 12.8% ITLRSGSVVSLYNRINSQTVRTKYTSIEAG--------------------------------QFCLRGDRWVPLRINLL- 22 214684.CND02990_from_515_to_804 96.4% 12.5% LTISHGTTVALFNRIKSQTTSTRYLSVVPDFTRTLGSDGRPVTG----AKAPQYENDKGALRGFTADASFWESFIIWLVD 23 5270.UM05862.1_from_568_to_756 74.4% 12.9% NQVKNGSMISLYNRINSQTARTKYMRSSNGGD-------------------------------LTVHNGDWSTYRITLI- consensus/100% ..h.ts..hshapR.psQp.pshaht.....................................h..ts..W..h.h.... consensus/90% .pl.pss.luLasR.poQpspT+Yhphpts................................th.sps.tWssa.l.h.. consensus/80% hsI.sGo.VuLFNRh+SQTlpT+Yhplpts................................thhusstpWssFtl.l.. consensus/70% hsIsuGopVuLFNRl+SQTVpT+YLpVcss................................tFtASuppWssFplpl.. cov pid 81 . 1 . . . . : . 160 1 4896.SPCC1223.13-1_from_631_to_825 100.0% 100.0% --DELNKGNNSNPSDSRSKV------------------LCSNMVIILVSKITGVQSPPL--------------------- 2 10090.ENSMUSP00000017151_from_205_to_357 73.3% 16.6% --ADGHCSQ--GDFPPQEGY------------------IRYGSLVQLVCTVTGITLPPM--------------------- 3 9986.ENSOCUP00000011572_from_147_to_299 72.8% 16.5% NVVDD-DESEGEEFTVRDGY------------------IHYGQTVKLVCSVTGMALPRL--------------------- 4 214684.CNA01890_from_397_to_554 66.2% 8.9% ----DHANAPFAYRTAR--------NKFDETDHLEGQQLTYGSIVVLVDLQTGVKSDPV--------------------- 5 99883.ENSTNIP00000007897_from_137_to_284 72.8% 17.2% --VSDHHSGHRD--VLSEGF------------------ICDGCVVQLVCTESGVALPPM--------------------- 6 7955.ENSDARP00000104008_from_156_to_305 72.8% 17.2% --VEE-TQAVHSEYTMCESY------------------ICYGCVVQLVCTDSGVALPPM--------------------- 7 7739.JGI242509_from_149_to_298 72.8% 16.7% --LEE-SQSESEHFTVRDGY------------------IHYGSCVKLVCCVTGMALPRL--------------------- 8 7425.XP_001600894_from_167_to_316 72.8% 16.3% --LDD-DESENEDFEAKDGY------------------IHYNSTVKLVCKDTGMALPRL--------------------- 9 31234.CRE27979_from_214_to_370 76.4% 19.2% --DDERGMQEADNFAVRDGF------------------VYYGSVVKLVDSVTGIALPRL--------------------- 10 28377.ENSACAP00000012194_from_155_to_305 73.3% 17.2% --ADEFCSQSKGEFLLREGY------------------IRYGSIVRLICTVTGMALPPL--------------------- 11 135651.CBN08231_from_160_to_312 74.4% 19.2% --DDKRGIQEAENFAARDGF------------------VYYGSVVKLVDSDTGLALPPL--------------------- 12 135651.CBN18395_from_170_to_328 77.9% 16.3% --DDEHGLQETEKLTVRDGF------------------VCYGSLVKIVDSVTGTALPLL--------------------- 13 135651.CBN24462_from_179_to_331 74.4% 17.2% --DEERGIQETGNFAVRDGF------------------LYYGSAVSLVDSVTGIALPRM--------------------- 14 6085.XP_002162622_from_212_to_361 72.8% 15.8% --CND-NEPDGEEVTVNEGI------------------VHYGQTVKLVFVKTNLATPMM--------------------- 15 135651.CBN14524_from_432_to_582 74.4% 17.7% --DDERGIQEAGNSAVRDGF------------------LKYGSVVILVDSVTGIALPRM--------------------- 16 51511.ENSCSAVP00000002376_from_187_to_365 72.8% 15.9% --IEE-NQPEADEFEVRDGY------------------VHYGTSVKLVCSVTGYSLPRLLHGQYTAFTRENHQSIRETMN 17 9258.ENSOANP00000026593_from_12_to_164 73.8% 13.4% --ADERFPP--GDFPLREGY------------------IRYGSLVQLVCTVTGVTLPPMMRSL----------------- 18 104341.JGI128774_from_289_to_440 72.3% 13.9% -SRPPNASNDPGP--LAGPGPQT---------------VLYGSKVILSDTVTGTPTPPL--------------------- 19 29883.JGI300968_from_247_to_400 64.1% 12.9% -RRPST---------VAAGGPQP---------------VTYGCEIVLSDTHSGISTSPL--------------------- 20 104341.JGI119714_from_507_to_834 94.9% 10.9% VNKPAGGVDSPPPPPIQPDYPSPPPNAIPFTNNGSQIPIYYNQTVVLQCLVSGVVSPVL--------------------- 21 4896.SPCC736.08-1_from_305_to_446 68.7% 12.8% ------LPDENGKLKVCDDVDNPEP-------------IKYGSIVELVDEATGTTSDPL--------------------- 22 214684.CND02990_from_515_to_804 96.4% 12.5% PSLPSGPSNHQAP---NPDWPRPPANIIPL--NTISHSIRYNSTVVLQSLRTGVISPTL--------------------- 23 5270.UM05862.1_from_568_to_756 74.4% 12.9% ---------SRPPLAELAGAEADS--------------VTYGSTIVLTDVNTGFSSDPL--------------------- consensus/100% ......................................lh.s..l.l....osh..s.h..................... consensus/90% ................t.sh..................lhYsphl.L.s..oGh..s.h..................... consensus/80% ....t......t...hptsh..................lhYGshV.Lss..TGhs.P.h..................... consensus/70% ....p.s.tptt...hppuh..................lpYGshVhLVsssTGhshP.h..................... cov pid 161 . . . 2 . . . . 240 1 4896.SPCC1223.13-1_from_631_to_825 100.0% 100.0% --------ILKKHDNWKVSLSSRAPSE----------------------AINCLSK-LAFQCHE-------------TKR 2 10090.ENSMUSP00000017151_from_205_to_357 73.3% 16.6% --------IIRKVAKQCALLDV---DE----------------------PISQLHK-CAFQFPSDTPGG--------AGT 3 9986.ENSOCUP00000011572_from_147_to_299 72.8% 16.5% --------IIRKVDKQTALLDA---DD----------------------PVSQLHK-CAFYL----KDT--------ERM 4 214684.CNA01890_from_397_to_554 66.2% 8.9% --------KVVRVESGKSVVGQYDGQ-----------------------PVSELQR-IGLVR----TIDGQEDMSEGCRW 5 99883.ENSTNIP00000007897_from_137_to_284 72.8% 17.2% --------VIRKVNKQHAILDV---DE----------------------PVSQLHK-CAFQF----RDG--------PHA 6 7955.ENSDARP00000104008_from_156_to_305 72.8% 17.2% --------VIRKVNKQQACLDV---DE----------------------PVSQLHK-CAFQF----RGS--------DHM 7 7739.JGI242509_from_149_to_298 72.8% 16.7% --------VIRKVDKQMAHLTA---DD----------------------PVSQLHK-CCFHL----KDS--------DRM 8 7425.XP_001600894_from_167_to_316 72.8% 16.3% --------IIRKVDKSMASLDA---DD----------------------PVSQLHK-CALFL----KDT--------DHM 9 31234.CRE27979_from_214_to_370 76.4% 19.2% --------RIRKVDKQQVILDASCSEE----------------------PVSQLHK-CAFQM----VDN--------EMV 10 28377.ENSACAP00000012194_from_155_to_305 73.3% 17.2% --------IIRKVTKQSVMLDV---DE----------------------PISQLHK-CAFQL----YGS--------DGM 11 135651.CBN08231_from_160_to_312 74.4% 19.2% --------RIRKVDNQQVILGASCSEE----------------------PVSQLHK-CAFQM----IDK--------EMV 12 135651.CBN18395_from_170_to_328 77.9% 16.3% --------RIRKVDKQQVILDASCSEE-----------------------VSQLHR-CALQM----IDN--------EMV 13 135651.CBN24462_from_179_to_331 74.4% 17.2% --------RIRKVDKKQVILDTTCSVE----------------------PVTQLNN-CAFQM----IDN--------EME 14 6085.XP_002162622_from_212_to_361 72.8% 15.8% --------IIRKVDKQTVVLDA---DD----------------------PVSQLHK-VAFYV----KGT--------NRS 15 135651.CBN14524_from_432_to_582 74.4% 17.7% --------RIRKVDKKQVILDATCSEE----------------------PVSQLHT-CAFQM----IGK--------EKA 16 51511.ENSCSAVP00000002376_from_187_to_365 72.8% 15.9% IFILVYLQIIRKVDRQMASLLS---DE----------------------PVSQLHK-CALYL----KDT--------DRQ 17 9258.ENSOANP00000026593_from_12_to_164 73.8% 13.4% --------RPREVNCQVAELGF----E----------------------PMTSDSKACALSSEPTSSGS--------QAW 18 104341.JGI128774_from_289_to_440 72.3% 13.9% --------FIRKVDK-------------------------GRIATDDGGPVSQMQK-IALQRVNADG----------TRH 19 29883.JGI300968_from_247_to_400 64.1% 12.9% --------VIRKVDK-------------------------GRVCAEDGGPVSQMQK-IALQRVNQDG----------SRH 20 104341.JGI119714_from_507_to_834 94.9% 10.9% --------IIRKVDHQTIVVG--GGLQEGAKGIADHYCAPGEVCGD---PVSQLHK-IAFEVYDPSRGVPEPGTPGPSGA 21 4896.SPCC736.08-1_from_305_to_446 68.7% 12.8% --------IIRRVEKDHIAEE----DG----------------------YVNQMHR-IVLESAYPIS----------NVR 22 214684.CND02990_from_515_to_804 96.4% 12.5% --------VVRRIETDSDAVGMDGHVHEVPA------MPPGELASD---LVSQLQK-VAFEIYSPDTMNRLQRESKYGGS 23 5270.UM05862.1_from_568_to_756 74.4% 12.9% --------VVCKVDKGQVQLPQLDPPSVLLKAGTGNKSRRVPIDPALRDKLATVSKSVSHANPSTSLGAGAS-----TSN consensus/100% ........h.hchtp...................................hsp.pp.hsh.................... consensus/90% ........hl++Vpp...................................lsphp+.huh.................th. consensus/80% ........hlRKVspt.s.ls.....p......................sloQlp+.hAh.h....h..........ph. consensus/70% ........hIRKV-+pps.Ls.....c......................PVSQLpK.sAhph....hss........pth cov pid 241 : . . . . 3 . . 320 1 4896.SPCC1223.13-1_from_631_to_825 100.0% 100.0% FL-----YIDEKQSS----------------------------------------------------------------- 2 10090.ENSMUSP00000017151_from_205_to_357 73.3% 16.6% YLCLATEKVVRFQAS----------------------------------------------------------------- 3 9986.ENSOCUP00000011572_from_147_to_299 72.8% 16.5% YLCLSQERIIQFQAT----------------------------------------------------------------- 4 214684.CNA01890_from_397_to_554 66.2% 8.9% YLSAPGARI----------------------------------------------------------------------- 5 99883.ENSTNIP00000007897_from_137_to_284 72.8% 17.2% FLCLSNDSVVRHQAS----------------------------------------------------------------- 6 7955.ENSDARP00000104008_from_156_to_305 72.8% 17.2% YLCLSNEKIIQFQAS----------------------------------------------------------------- 7 7739.JGI242509_from_149_to_298 72.8% 16.7% YLCVSQERIIQFQAA----------------------------------------------------------------- 8 7425.XP_001600894_from_167_to_316 72.8% 16.3% YLCLSQEKIVPFNAT----------------------------------------------------------------- 9 31234.CRE27979_from_214_to_370 76.4% 19.2% YLCLSHDKIIQHQAQ----------------------------------------------------------------- 10 28377.ENSACAP00000012194_from_155_to_305 73.3% 17.2% YLCLSAEKVIQFQAA----------------------------------------------------------------- 11 135651.CBN08231_from_160_to_312 74.4% 19.2% YLNISDDGIVQHQAQ----------------------------------------------------------------- 12 135651.CBN18395_from_170_to_328 77.9% 16.3% YLCLSRDEIVQHQAQ----------------------------------------------------------------- 13 135651.CBN24462_from_179_to_331 74.4% 17.2% YLSLSQDKIVQHKAQ----------------------------------------------------------------- 14 6085.XP_002162622_from_212_to_361 72.8% 15.8% YLSINQEKVIMFQAS----------------------------------------------------------------- 15 135651.CBN14524_from_432_to_582 74.4% 17.7% YLSLSDEKIIQHEAQ----------------------------------------------------------------- 16 51511.ENSCSAVP00000002376_from_187_to_365 72.8% 15.9% YLCLSQEKIVVHKAT----------------------------------------------------------------- 17 9258.ENSOANP00000026593_from_12_to_164 73.8% 13.4% ALSTKPGGCFSKPCCFSNHGS----------------------------------------------------------- 18 104341.JGI128774_from_289_to_440 72.3% 13.9% YLS-------------------------------------------------------AAGPMSGQPGVPV--------- 19 29883.JGI300968_from_247_to_400 64.1% 12.9% YLS-------------------------------------------------------AAGPIPGTPGVVA--------- 20 104341.JGI119714_from_507_to_834 94.9% 10.9% FLSCMGEKVNTYRPVDGRVWNAVPG-AQSRESNSPIATPASPTDDGTPTSTTGSVDYFGSGSMSSTPTSPAADFPSNDGG 21 4896.SPCC736.08-1_from_305_to_446 68.7% 12.8% HL-----KIAEHSSL----------------------------------------------------------------- 22 214684.CND02990_from_515_to_804 96.4% 12.5% WLSCYQDEVREHAIKAERKWAVLQAPAGSKPTSRPNSLPNTPQQR------------FGVLPM--TPHTNNMNLPS---- 23 5270.UM05862.1_from_568_to_756 74.4% 12.9% HIEKPGSSVQSAIKIDGGETA----------------------------------------------------------- consensus/100% hl.............................................................................. consensus/90% aLp.....h....................................................................... consensus/80% aLsh..ttl..h.................................................................... consensus/70% aLsh.tpplhpapst................................................................. cov pid 321 . . : . . ] 372 1 4896.SPCC1223.13-1_from_631_to_825 100.0% 100.0% ---------------------EISFTSGELEYSDPNDPTKATHSVLPWSAMW 2 10090.ENSMUSP00000017151_from_205_to_357 73.3% 16.6% ---------------------------------LCPKEANRA--LLNDSSCW 3 9986.ENSOCUP00000011572_from_147_to_299 72.8% 16.5% ---------------------------------PCPKEPNKE--MINDGASW 4 214684.CNA01890_from_397_to_554 66.2% 8.9% -----------------------------------------------GGGEL 5 99883.ENSTNIP00000007897_from_137_to_284 72.8% 17.2% ---------------------------------CSPREPSRV--VLNEGSCW 6 7955.ENSDARP00000104008_from_156_to_305 72.8% 17.2% ---------------------------------PCPKESNKV--SLNDGSCW 7 7739.JGI242509_from_149_to_298 72.8% 16.7% ---------------------------------ECPKDPTKE--ILNDGAAW 8 7425.XP_001600894_from_167_to_316 72.8% 16.3% ---------------------------------PSPKEANKH--MINDGACW 9 31234.CRE27979_from_214_to_370 76.4% 19.2% ---------------------------------AVNEHRHKSTMELPMGAVA 10 28377.ENSACAP00000012194_from_155_to_305 73.3% 17.2% ---------------------------------PCAKEKNRE--LLNDSSCW 11 135651.CBN08231_from_160_to_312 74.4% 19.2% ---------------------------------IIDENRH----QIKDGAAW 12 135651.CBN18395_from_170_to_328 77.9% 16.3% ---------------------------------IIDENRH----QIKDGAAW 13 135651.CBN24462_from_179_to_331 74.4% 17.2% ---------------------------------AIDENRH----QINDGAAW 14 6085.XP_002162622_from_212_to_361 72.8% 15.8% ---------------------------------PCSKDPKRD--VISDAASW 15 135651.CBN14524_from_432_to_582 74.4% 17.7% ---------------------------------IIGENRH----EISDGAAW 16 51511.ENSCSAVP00000002376_from_187_to_365 72.8% 15.9% ---------------------------------QSTKNPSMD--CLNDGACW 17 9258.ENSOANP00000026593_from_12_to_164 73.8% 13.4% ---------------------------------GPDSTPSLLFHSLLRHPNL 18 104341.JGI128774_from_289_to_440 72.3% 13.9% ---------PPTPGLANQTGTHPLLFSIPRVREEVKDNQNVIIDEVDDYLCW 19 29883.JGI300968_from_247_to_400 64.1% 12.9% --------------------------PPAPGMS----TQAGTHPLLFQSPRI 20 104341.JGI119714_from_507_to_834 94.9% 10.9% RVKKAKRGSSSAGTASKSTSAKGRRRPTSAGSAGSGRRASASDSSASSGALW 21 4896.SPCC736.08-1_from_305_to_446 68.7% 12.8% ---------------------------------AYSNNIS---------VRW 22 214684.CND02990_from_515_to_804 96.4% 12.5% ----------------TPSSPVSSSSSLDYFNYQSQRSSGHNHSLMSPGSVE 23 5270.UM05862.1_from_568_to_756 74.4% 12.9% ---------------------------------VSSAPTGATSTSANVGSET consensus/100% .................................................... consensus/90% ....................................t..t.....h..ts.h consensus/80% ...................................spp.p.....h..uuth consensus/70% ...................................scp.ph....lssuusW