cov    pid   1 [        .         .         .         .         :         .         .         . 80 
1 CLUS_BOVIN     100.0% 100.0%     ------KELQEMSTEGSKYVNKEIKNALKEVKQIKTQIEQTNEERKLLLSSLEEAKKKKEDALNDTRDSENKLKASQGVC    
2 CLUS_CANFA     100.0%  85.8%     DQAVSDTELQEMSTEGSKYINKEIKNALKGVKQIKTLIEQTNEERKSLLSNLEEAKKKKEDALNDTKDSETKLKASQGVC    
3 CLUS_MOUSE     100.0%  76.1%     EQEVSDNELQELSTQGSRYINKEIQNAVQGVKHIKTLIEKTNAERKSLLNSLEEAKKKKEDALEDTRDSEMKLKAFPEVC    
4 CLUS_RAT       100.0%  76.1%     EQEFSDNELQELSTQGSRYVNKEIQNAVQGVKHIKTLIEKTNAERKSLLNSLEEAKKKKEGALDDTRDSEMKLKAFPEVC    
5 CLUS_HUMAN     100.0%  79.5%     DQTVSDNELQEMSNQGSKYVNKEIQNAVNGVKQIKTLIEKTNEERKTLLSNLEEAKKKKEDALNETRESETKLKELPGVC    
6 CLUS_COTJA     100.0%  47.2%     QGLVPPNELKQLSAAGSKYIDAEVENAINGVKQMKTLMDKTSKEHQAMLHTLEETKKKKEEAVKLALEKEKQLAEKQEVC    
7 Q29482         100.0%  84.7%     DKAVSDRELQEMSTQGSNYINKEIKNALKGVKQIKNLIEQTNEERKSLLGTLEEAKKKKEGALNDTKDSEMKLKESQGVC    
8 Q29549         100.0%  89.2%     DKAISDKELQEMSTEGSKYVNKEIKNALKEVKQIKTLIEQSNEERKSLLSSLEEAKKKKEDALNDTRDTETKLKGSQGLC    
9 Q15846          99.4%  25.0%     DKTAISENLKSFSEVGEIDADEEVKKALTGIKQMKIMMERKEKEHTNLMSTLKKCREEKQEALKLLNEVQEHLEEEERLC    
  consensus/100%                   ......ppLpphSt.Gp..hstElppAlptlKphK..h-ppptE+p.hhtsLccs+ccKptAlp.h.-.p.pLtt..tlC    
  consensus/90%                    ......ppLpphSt.Gp..hstElppAlptlKphK..h-ppptE+p.hhtsLccs+ccKptAlp.h.-.p.pLtt..tlC    
  consensus/80%                    pt.h.spELpphSstGSpYlscElpNAlptVKphKshhEpostE+psLLssLEEsKKKKEtALp.sp-sE.+Lct..tlC    
  consensus/70%                    -pthsspELQEhSspGS+YlNKEIpNAlpGVKQIKTLIEpTNcERKsLLsoLEEAKKKKE-ALp-T+-oEhKLKt..tVC    

                    cov    pid  81          .         1         .         .         .         .         :         . 160
1 CLUS_BOVIN     100.0% 100.0%     NETMTALWEECKPCLKQTCMKFYARVCRSGSGLVGHQLEEFLNQSSPFYFWINGD--RIDSLMENDREQSHVMDVMEDSF    
2 CLUS_CANFA     100.0%  85.8%     NDTMMALWEECKPCLKQTCMKFYARVCRSGSGLVGHQLEEFLNQSSPFYFWMNGD--RIDSLLENDRQQTHALDVMQDSF    
3 CLUS_MOUSE     100.0%  76.1%     NETMMALWEECKPCLKHTCMKFYARVCRSGSGLVGQQLEEFLNQSSPFYFWMNGD--RIDSLLESDRQQSQVLDAMQDSF    
4 CLUS_RAT       100.0%  76.1%     NETMMALWEECKPCLKHTCMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGD--RIDSLLESDRQQSQVLDAMQDSF    
5 CLUS_HUMAN     100.0%  79.5%     NETMMALWEECKPCLKQTCMKFYARVCRSGSGLVGRQLEEFLNQSSPFYFWMNGD--RIDSLLENDRQQTHMLDVMQDHF    
6 CLUS_COTJA     100.0%  47.2%     NETMLSLWEECKPCLKHTCMRVYSKMCHSGSGLVGRQLEEFLNRSSPFSIWVNGE--RIDDLLDREQRQERRFEDLEERF    
7 Q29482         100.0%  84.7%     NETMTALWEECKPCLKQTCMKFYARVCRSGSGLVGHQLEEFLNQSSPFYFWINGD--RIDSLLENDRQQTHVLDVMQDSF    
8 Q29549         100.0%  89.2%     NETMMALWEECKPCLKQTCMKFYARVCRSGSGLVGHQLEEFLNQSSPFYFWINGD--RIDSLMENDRQQSHVMDIMEDSF    
9 Q15846          99.4%  25.0%     RESLADSWGECRSCLENNCMRIYT-TCQPSWSSVKNKIERFFRKIYQFLFPFHEDNEKDLPISEKLIEEDAQLTQMEDVF    
  consensus/100%                   p-ohhs.WtEC+sCLcpsCM+hYs.hCpsu.u.VtpplEcFhpp...F.h.hpt-..+..sl.-p..pppt.hp.hp-.F    
  consensus/90%                    p-ohhs.WtEC+sCLcpsCM+hYs.hCpsu.u.VtpplEcFhpp...F.h.hpt-..+..sl.-p..pppt.hp.hp-.F    
  consensus/80%                    NETMhuLWEECKPCLKpTCM+hYu+sC+SGSGLVGpQLEEFLNpSSPFhFWhNGD..RIDsLhEp-ppQsphh-.MpDpF    
  consensus/70%                    NETMhALWEECKPCLKpTCMKFYARVCRSGSGLVG+QLEEFLNQSSPFYFWhNGD..RIDSLhEsDRpQophhDsMpDsF    

                    cov    pid 161          .         ] 180
1 CLUS_BOVIN     100.0% 100.0%     TRASSIMDELFQDRFFLR--    
2 CLUS_CANFA     100.0%  85.8%     NRASSIMDELFQDRFFTR--    
3 CLUS_MOUSE     100.0%  76.1%     ARASGIIDTLFQDRFFAR--    
4 CLUS_RAT       100.0%  76.1%     TRASGIIDTLFQDRFFTH--    
5 CLUS_HUMAN     100.0%  79.5%     SRASSIIDELFQDRFFTR--    
6 CLUS_COTJA     100.0%  47.2%     GLMEDGVEDIFQDSTQLY--    
7 Q29482         100.0%  84.7%     DRASSIMDELFQDRFFTR--    
8 Q29549         100.0%  89.2%     NRASNIMDELFQDRFFNR--    
9 Q15846          99.4%  25.0%     SQLTVDVNSLFNRSFNVFRQ    
  consensus/100%                   s.hps.hpplFpcph..h..    
  consensus/90%                    s.hps.hpplFpcph..h..    
  consensus/80%                    sphoshh-pLFQDpF.hh..    
  consensus/70%                    sRASsIhDpLFQDRFFs+..