cov pid 1 [ . . . . : . . . 80 1 CA12_BOVIN/1-2 100.0% 100.0% -----------------------------------------------------------TLDAMKVFCNMET----GETC 2 Q90412/1-236 100.0% 56.4% DVEVDATLKSING---QIEDIRSPDGSR-KNPARSCRDLKLCHPEWKSGDYWVDPNLGSAADAIKVFCNMET----GETC 3 CA13_CHICK/1-2 100.0% 50.0% LGEIMSSMKSINN---QIENILSPDGSR-KNPARNCRDLKFCHPELKSGEYWIDPNQGCKMDAIKVYCNMET----GETC 4 CA25_HUMAN/1-2 99.4% 47.5% DPGVHATLKSLSS---QIETMRSPDGSK-KHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMET----GETC 5 CA21_CHICK/1-2 100.0% 47.7% DYEVDATLKTLNN---QIETLLTPEGSK-KNPARTCRDLRLSHPEWSSGFYWIDPNQGCTADAIRAYCDFAT----GETC 6 P90679/1-225 93.9% 35.2% DENAFEALVEIGD---AIEAFKNPTGTH-AAPARTCKDLAMAHPEFEDGMYWVDPNQGSPVDAIEVFCDIQA----HQTC 7 Q26052/1-215 87.8% 27.4% DDELLASINSLSQ---QIEMIKTPQGKSQNNPARSCKDIFLNDANAESGTYWVDPNLGCHQDAIQVHCEQET----QATC 8 CA15_HUMAN/1-2 96.1% 30.0% MEEIFGSLNSLKL---EIEQMKRPLGTQ-QNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAG---GSTC 9 CA2B_HUMAN/1-1 77.3% 22.8% LEEIFGSLDSLRE---EIEQMRRPTGTQ-DSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAG---GETC 10 Q26055/1-229 93.4% 27.0% RTKFELYLAKFDN---EIRSLLEPLGSR-DQPIRSCKDLFKCFQRPKMATTGSDSNEGSIKDRFLAHCVKRGESGSPETC 11 CAF1_EPHMU/1-2 82.3% 22.4% TDVNLGSVADVIELHKKLQHLKSPTGTK-DSPARSCHDLFLEDNSTSDGYYWIDPNGGCIGDAVKVFCNFTGG--VQQTC consensus/100% .............................................................Dth.saC..ts.....tTC consensus/90% .......h.ph.....tlp.hhpP.Gpp.ttPhRsCpDl.ht..t...u.hh.DsN.Gs..DuhpsaCshps....tpTC consensus/80% ..th.tsltpltt...pIcthhpP.Gop.ppPARoCcDLhhscsph.sG.YWlDPN.GshhDAhcVaCshps....tpTC consensus/70% ..ph.uoltslpp...pIEphhpPpGop.psPARoC+DLhhsasphpsG.YWlDPNtGshtDAh+VaCshps....spTC cov pid 81 . 1 . . . . : . 160 1 CA12_BOVIN/1-2 100.0% 100.0% VYPNPASVPKKNWWSSKS-KDKKHIWFGETINGGFHFSYGDDNLAPNTADVQMTFLRLLSTEGSQNITYHCKNSIAYLDE 2 Q90412/1-236 100.0% 56.4% VKPSTPKIPRKNWWTSKS-KAQKHVWFGESMNGGFHFSYADGSQTPSTTTIQLNFLRLLSTEATQTITYHCKNSVAYMDQ 3 CA13_CHICK/1-2 100.0% 50.0% LSANPATVPRKNWWTTES-SGKKHVWFGESMKGGFQFSYGDPDLPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMNQ 4 CA25_HUMAN/1-2 99.4% 47.5% ISANPSSVPRKTWWASKS-PDNKPVWYGLDMNRGSQFAYGDHQ-SPNTAITQMTFLRLLSKEASQNITYICKNSVGYMDD 5 CA21_CHICK/1-2 100.0% 47.7% IHASLEDIPTKTWYVSKNPKDKKHIWFGETINGGTQFEYNGEGVTTKDMATQLAFMRLLANHASQNITYHCKNSIAYMDE 6 P90679/1-225 93.9% 35.2% VMAKPGQIFKGVWYRGEP----GHVWFADEMENGLLVHLQGGN-------VQMTFLQLLSTEAVQNITYHCKNSVAYYDK 7 Q26052/1-215 87.8% 27.4% VSPSMSQIINSTWYVGKV-----KRTYFSTMEGGDKFSYIEEP-------TQMTFLRLLSTSARQTVTYYCKNVAG---- 8 CA15_HUMAN/1-2 96.1% 30.0% VFPDKKSEGARITSWPKE---NPGSWFSEFKR-GKLLSYVDAEGNP-VGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDA 9 CA2B_HUMAN/1-1 77.3% 22.8% VTP--------------------------RDD-VTQFSYVDSEGSP-VGVVQLTFLRLLSVSAHQDVSYPCSGAAR---- 10 Q26055/1-229 93.4% 27.0% ITPRVDEIAPARWYEGAS-----GSRYDLRMG-LDKFSYEASE-------VQLTFLRLLSTKAHQNVTYHCKNSVAVHNS 11 CAF1_EPHMU/1-2 82.3% 22.4% ISATKNAGDLKSW-SGHS------IWFSDMLG-GFKLTYDISR-------SQLQFIRAASRHAVQSFTYKCRNS------ consensus/100% l.s............................t.h..hth............QhtFhphhu.pu.QshoY.C.ts...... consensus/90% l.sp..t...t.h..st........ha...ht.s..hpY.ttt.......sQhsFlRlLStpA.QslTYhCpsuht.... consensus/80% l.sp.tph..t.W..scs.......has.php.G.phsY.stp.......sQhsFLRLLSspApQslTYhC+NShu.... consensus/70% lpss.splstpsWa.ucs.....thWaupphp.GhpFoYsssp.......sQhsFLRLLSscApQslTY+CKNSluh.st cov pid 161 . . . 2 . . . . 240 1 CA12_BOVIN/1-2 100.0% 100.0% AAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLK-DGCTKHTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDI 2 Q90412/1-236 100.0% 56.4% ATGNLKKAILLQGSNDVEIRAEGNSRFTYGVLE-DGCKKHTGQWAKTVIEYKTQKTSRLPIMDIAPMDIGGADQEFGVDI 3 CA13_CHICK/1-2 100.0% 50.0% ASGNVKKALKLMSSVETDIKAEGNSKYMYAVLE-DGCTKHTGEWGKTVFEYRTRKTMRLPVVDIAPIDIGGPDQEFGVDV 4 CA25_HUMAN/1-2 99.4% 47.5% QAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQ-DTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEI 5 CA21_CHICK/1-2 100.0% 47.7% ETGNLKKAVILQGSNDVELRAEGNSRFTFSVLV-DGCSKKNNKWGKTIIEYRTNKPSRLPILDIAPLDIGGADQEFGLHI 6 P90679/1-225 93.9% 35.2% ANDNLDSAAMFMTSNDLELNAD-KPKFRYEVLL-DECQHKQSKWTKTVFEFKTTKTRRLPIVDIAPSDIGGEDQAFGLEI 7 Q26052/1-215 87.8% 27.4% -------NPIFRSSSEIELVDDETSKFNYNIIE-DGCSTATSQKGKSVYEYETKKTTRLPIVDFAPGEVGLENQKFGLEM 8 CA15_HUMAN/1-2 96.1% 30.0% ATGSYDKALRFLGSNDEEMSYD--NNPYIRALV-DGCATKKGYQ-KTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEV 9 CA2B_HUMAN/1-1 77.3% 22.8% -----DGPLRLRGANEDELSPE--TSPYVKEFR-DGCQTQQG---RTVLEVRTPVLEQLPVLDASFSDLGAPPRRGGVLL 10 Q26055/1-229 93.4% 27.0% QTGSTEQALRLMTTSDVELSPDAPFLEQYEVIGEDGCQDRSAELSQTVIKYSTRRNTRLPIVDVAPSDIGGVDQEFGITL 11 CAF1_EPHMU/1-2 82.3% 22.4% -----AAAVIFRTQDNKEIAAN---KVTY-----DGCKSRPSVPDAAFVAVETKRVEQLPIRDFASSDIAGQHQEFGFEM consensus/100% .......s.hh.stsp.-h..p......h.....DtCtpt.s...tshhthpo....plPlhDh...-hu...pthGh.h consensus/90% .....ttshhh.sss-.-lts-...p..h..h..DsCppppu...pohhchcT.pstpLPlhDhu..DlGt.pQcFGhph consensus/80% .....ctAlhh.sus-hElps-...p.hathl..DGCpp+pu..s+TlhEhcTp+sppLPIlDhAs.DlGu.sQcFGlcl consensus/70% tstshcpAlhhhuos-hElps-..s+hpYtll..DGCpp+suphsKTVhEacTp+spRLPIlDlAP.DlGGscQcFGl-l cov pid 241 ] 246 1 CA12_BOVIN/1-2 100.0% 100.0% GPVCFL 2 Q90412/1-236 100.0% 56.4% GAVCFL 3 CA13_CHICK/1-2 100.0% 50.0% GPVCFL 4 CA25_HUMAN/1-2 99.4% 47.5% GPVCFV 5 CA21_CHICK/1-2 100.0% 47.7% GPVCFK 6 P90679/1-225 93.9% 35.2% GPVCFS 7 Q26052/1-215 87.8% 27.4% GPVCFS 8 CA15_HUMAN/1-2 96.1% 30.0% GPACFM 9 CA2B_HUMAN/1-1 77.3% 22.8% GPVCFM 10 Q26055/1-229 93.4% 27.0% GPVCFS 11 CAF1_EPHMU/1-2 82.3% 22.4% GPACFY consensus/100% GssCF. consensus/90% GPsCF. consensus/80% GPVCF. consensus/70% GPVCFh