cov    pid  1 [        .         .         .         .         :         .         .         . 80 
 1 COL2_PIG       100.0% 100.0%    VPDPRGIIINLDEGELCLNSAQCKSNCCQHDTILSLSRCALKARENSECSAFTLYGVYYKCPCERGLTCEGDKSLVGSIT    
 2 COL_CANFA      100.0%  80.0%    VPDPRGIIIHLEDGELCLNSVQCKSKCCHRATGLSLARCAPKASENSECSAKTLYGVYYKCPCERGLTCEGDKSIVGSIT    
 3 COL_RABIT       94.7%  78.9%    APGPRGIVINLEEGELCLNSAQCKSGCCHHSSALSLARCAPKASENSECSPQTIYGVYYKCPCERGLTCEGDKSIVGSIT    
 4 COL_CHICK       35.8%  70.6%    -----GLIFNLDTGELCLQSAQCKSECCQEDSGLSLAXC-----------------------------------------    
 5 COLA_HORSE     100.0%  74.7%    VPDPRGVIINLEAGEICLNSAQCKSECCHQESSLSLARCAAKASENSECSAWTLYGVYYKCPCERGLTCQVDKTLVGSIM    
 6 COL_HUMAN      100.0%  75.8%    APGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMASENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSIT    
 7 COL_RAT        100.0%  67.4%    VPGPRGLFINLEDGEICVNSMQCKSRCCQHDTILGIARCTHKAMENSECSPKTLYGIYYRCPCERGLTCEGDRSIIGAIT    
 8 COL_SQUAC       41.1%  60.0%    APE-RGLFLNLSAGELCVGSFQCKSSCCQRETGLSLARCA----------------------------------------    
 9 COLB_HORSE     100.0%  73.7%    VPDPRGVIINLEAGEICMNSAQCKSECCHRESSLSLARCAAKASENSECSAWTLYGVYYKCPCERGLTCQVDKTLVGSIM    
10 COL_MYOCO       98.9%  71.3%    APDPRGLIINLDNGELCLNSAQCKSQCCQHDSPLGLARCADKARENSGCSPQTIYGIYYLCPCERGLTCDGDKSIIGAIT    
   consensus/100%                  .....GlhhpLptGElChtShQCKStCCppto.Lulu.C.........................................    
   consensus/90%                   sPt.RGlhlNL-tGElChsShQCKSpCCpcpo.LuLARCs........................................    
   consensus/80%                   sPsPRGllINL-sGElClNSsQCKSpCCp+posLuLARCs.hA.ENStCSs.TlYGlYYhCPCERGLTCpsD+ollGuIh    
   consensus/70%                   sPsPRGlIINL-sGELClNSAQCKSpCCp+-ouLSLARCA.KApENSECSs.TlYGlYY+CPCERGLTCpsDKollGuIh    

                     cov    pid 81          .    ] 95 
 1 COL2_PIG       100.0% 100.0%    NTNFGICHNVGRSDS    
 2 COL_CANFA      100.0%  80.0%    NTNFGVCHDAGRSKK    
 3 COL_RABIT       94.7%  78.9%    NTNFGVCLDV-----    
 4 COL_CHICK       35.8%  70.6%    ---------------    
 5 COLA_HORSE     100.0%  74.7%    NTNFGICFDAARSEE    
 6 COL_HUMAN      100.0%  75.8%    NTNFGICHDAGRSKQ    
 7 COL_RAT        100.0%  67.4%    NTNYGVCLDSTRSKQ    
 8 COL_SQUAC       41.1%  60.0%    ---------------    
 9 COLB_HORSE     100.0%  73.7%    NTNFGICFDAARSEE    
10 COL_MYOCO       98.9%  71.3%    NTNYGICQDPQSKK-    
   consensus/100%                  ...............    
   consensus/90%                   ...............    
   consensus/80%                   NTNaGlC.ss.....    
   consensus/70%                   NTNaGlChDstppc.