Family alignment for the CTD domain, displayed in

                                     cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 5141.NCU06929.1_from_863_to_10 100.0% 100.0%     TARTPAWN----------RDAGGSRTPAWN---DGSRTVNPYDGSRTPYGGATAYGGIGSRTPAWHS-GSRTPAP-----    
 2 5518.FG07524.1_from_851_to_991  87.2%  66.5%     SGRTPAWKA---------QDMSGARTPAWA---DGSRTVNPYDGSRTAYG-------SGGRTPAWQA-GGRTPAPG----    
 3 5085.AFUA_4G08500_from_854_to_  84.0%  48.3%     SSRTPAWGGASSARTPAWAGISGSRTPAWKM--DGSRTSNPYDGSRTAYGG------AGSRTPAWNA-GARTPYDSGSGS    
 4 4896.SPAC23C4.19_from_869_to_9  75.0%  28.6%     GSRTPAWN-------------SGNKTPAWN---VGNKTP--------AWN-------SGAKTPAWNA-GNKTPSWN----    
 5 5207.CNA06210_from_853_to_1001  83.3%  28.0%     GGKTPSAAN-----------ASGGKTPAWGA--SGGKTP--------AYG-----MASGGKTPAYGMQGGKTPNAYAMAP    
 6 7227.CG7626-PA_from_812_to_929  63.5%  15.4%     GAQTPSYTA------------AGSKTPLVG-----SQTP---------NWDTDTRTPYGTMTPSHDG--SMTPRH-GAWD    
 7 7165.AGAP005021-PA_from_816_to  62.2%  16.8%     GAQTPVYS--------------GSKTPLHG-----SQTP---------QYDPGSRTPYGSMTPSHDG--SMTPRH-GAWD    
 8 8364.ENSXETP00000006329_from_2  68.6%  16.1%     GSQTPMYG-------------TGSRTPMYG-----SQTP---------LHDGDRTPHYGSQTPLHDG--SRTPAQSGAWD    
 9 6239.K08E4.1_from_812_to_920    60.3%  18.1%     GSKTPMYGA---------------QTPMYG-----SMTPA-------YDGGRTPAYGEGGRTPAYG---SKTPAYGDLDE    
10 4952.YALI0C11561g_from_814_to_  72.4%  20.9%     GSRTPAANA------------GGAQTPAWG-----AMG-----------NKTPSWGASESRTPAWGG--AKTPAWGAAG-    
11 4932.YML010W_from_902_to_1033   71.2%  13.0%     GGMTPGWSS-----------FDGGKTPAVN-----AHGGSGGGGVSSWGGASTWGGQGNGGASAWGGAGGGASAWGGQGT    
12 5478.CAGL0H04697g_from_853_to_  69.9%  12.4%     GGMTPGWGA-----------FDGGKTPAVN-----SHGAGTSGATSAWGGASTWGGQGAGGSSTWGGQGGATSTWGGQ--    
13 33169.AGOS_ADR187W_from_799_to  71.8%  11.2%     GGMTPGWSY-----------FDGGKTPAVG-----SHG---AGAASAWGGASSWGGQGGGATSTWGGQPGNVFTWGGQT-    
14 28985.KLLA0B00891g_from_855_to  70.5%  13.6%     GGMTPGWNA-----------FDGGKTPAVG-----QNG-----GTSSWGGASTWGGQGPGGASAWGGAAGNTSTWGGQ--    
15 7227.CG7360-PA_from_67_to_192   70.5%  14.5%     PAATPAFG-------------APASTPGFG-----ATS----TAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAA--    
16 5691.Tb11.01.3690_from_41_to_1  59.0%  12.9%     GGDTPKVVV-------------NTELSAWR-----GHAT----------PTPSAYAMDPAKTPTMRATGGATPVQG----    
17 5691.Tb11.01.2885_from_1283_to  91.0%  16.0%     AGTTPAFGQG----------AAAGTTPAFGQGAAAGTTPAFGQGVTAGTTPAFGQGAAAGTTPAFGQGAAANKASVFGQG    
18 6239.K08E4.1_from_926_to_1071   75.6%  16.8%     PSRTPNYDS-------------SSKTPAYPESEHSARTP----AYNNDYDIPLSPAYEPDAPEAYDNAPARTPAFVSRTP    
19 43179.ENSSTOP00000004427_from_  67.3%  17.1%     HSRSPATRG-----------RSRSRTPARR-----GRSR----------SRTPARRRSRSRTPARRRSRSRTPARRGRSR    
   consensus/100%                                   .u.oP.h.................phshh......t.s.....................s.s..h....s.s........    
   consensus/90%                                    su.TP.ht...............spTPhht.....s.s.....................shsssht...u.s........    
   consensus/80%                                    su.TPshs..............supTPhhs.....ups...........s........sutsssatt..utTss......    
   consensus/70%                                    uupTPuas.............suu+TPAhs.....upss..........sts...h.tsutTsuasu..utTPs.ss...    

                                     cov    pid  81          .         1         .         .         .         .         :         . 160
 1 5141.NCU06929.1_from_863_to_10 100.0% 100.0%     ---DSFGHGSKTPAWSAGSDSWG--SKTPGYGASAPTPGASG-DAWGYTPGASGGGNSSSAYDAPTPGGGLSAPTPGA--    
 2 5518.FG07524.1_from_851_to_991  87.2%  66.5%     ---DAFGAGSRTPAYGGG-DSWGSGSKTPAWGVTAPTPGASGGDAWG--PGS---------YDAPTPGGALGAPTPG---    
 3 5085.AFUA_4G08500_from_854_to_  84.0%  48.3%     SGFDAFAAGSRTPAWGGA-NAGG---RTPAWSASS-SAGSGNRDSRG--------------YDAPNPGGAYSAPTPG---    
 4 4896.SPAC23C4.19_from_869_to_9  75.0%  28.6%     -------NGTKTPAWNANQTPMVANGTNTSWGQTPAYGGFSE-----------------TNWDTEDNSKPYTAPTPG---    
 5 5207.CNA06210_from_853_to_1001  83.3%  28.0%     ----PGPSGGRTPAYGAYGRPEASGSRPSVMAPPSAPYSAPYSAPTPAGNG---------APTPAIPGNPYTAPTPYGAP    
 6 7227.CG7626-PA_from_812_to_929  63.5%  15.4%     ------PTANTTPARN-NDFDYS-LEEPSPSP---------------------------------GY----NPSTPGY--    
 7 7165.AGAP005021-PA_from_816_to  62.2%  16.8%     ------PTVSNTPARS-NDFDF--MEEPSPSP---------------------------------GY----NPSTPGY--    
 8 8364.ENSXETP00000006329_from_2  68.6%  16.1%     ------PNNPNTPSRADEEYDYRYDDEPSPSPQ--------------------------------GYGGTPNPQTPGYPD    
 9 6239.K08E4.1_from_812_to_920    60.3%  18.1%     ------HSSSRTPAYGNDSSRTP------------------------------------------AYGSADGARTPAYGS    
10 4952.YALI0C11561g_from_814_to_  72.4%  20.9%     -------AGSKTPAFG--VARTPSWKSSSAGTYGGSSSRNKG---------------------WEDLGSGNSAPTPGYAA    
11 4932.YML010W_from_902_to_1033   71.2%  13.0%     ---------GATSTWGGASAWGNKSSWGGASTWAS-------------------------------GGESNGAMSTWGGT    
12 5478.CAGL0H04697g_from_853_to_  69.9%  12.4%     ---------GATSTWGGASAWGNKSSWGGASTWAA-------------------------------SGEANGGVSTWGG-    
13 33169.AGOS_ADR187W_from_799_to  71.8%  11.2%     ---------GATSTWGGASTWGNKSTWGGASTWAS-------------------------------GGE-NGAASTWGG-    
14 28985.KLLA0B00891g_from_855_to  70.5%  13.6%     ---------GATSTWGGASTWGNKSSYGGASSWAA-------------------------------SGE-SGAASAWGG-    
15 7227.CG7360-PA_from_67_to_192   70.5%  14.5%     ---------AATPAFGAPAATPAFGAPAATSAFGA-------------------------------PAATTAFGAPAST-    
16 5691.Tb11.01.3690_from_41_to_1  59.0%  12.9%     ---------GQTPMFGGQTPVFG------------------------------------------GQTPAFGSGTP----    
17 5691.Tb11.01.2885_from_1283_to  91.0%  16.0%     ------VTAGTTPAFGQGAGGCVSNSVFGTTPASGGCELGTICGFGSDPSG--------VKSLRVNLGANCGVGTPSVFG    
18 6239.K08E4.1_from_926_to_1071   75.6%  16.8%     G---YDTYENSSPTYEPDAATKVEEDIGDTSSPTYD-----------------------------SPPHSYVVPTPGAML    
19 43179.ENSSTOP00000004427_from_  67.3%  17.1%     ---------SRTPARRRSRTRSPVRRRSRSRSPAR-------------------------------RSGRSRSRTPARRG    
   consensus/100%                                   .........stos.ht..........................................................ss....    
   consensus/90%                                    .........stTssht.......................................................ss.os....    
   consensus/80%                                    .........stTsshs.tt..hs..t.sss.s...................................st..ss.osh...    
   consensus/70%                                    .........upTPsaussss.hs..p.sss.s.s.................................uts.sssTPhh..    

                                     cov    pid 161          .         .         .         2       ] 208
 1 5141.NCU06929.1_from_863_to_10 100.0% 100.0%     -----------ALNAPTPGAY--SAPTP--AA----------VSAPTP    
 2 5518.FG07524.1_from_851_to_991  87.2%  66.5%     -----------AMNAPTPGAY--SAPTP--AA----------ISAPTP    
 3 5085.AFUA_4G08500_from_854_to_  84.0%  48.3%     -----------AYTAPTPGA---SAPTPGAWA----------DSAPTP    
 4 4896.SPAC23C4.19_from_869_to_9  75.0%  28.6%     -----------AWAAPTPGGW--DDEEGDSPK----------YVPPSP    
 5 5207.CNA06210_from_853_to_1001  83.3%  28.0%     ----------TPYAAPTPGMPSLSAPTPGPGAG----------IAPTP    
 6 7227.CG7626-PA_from_812_to_929  63.5%  15.4%     -------QMTSQFAPQTPGT--LYGSDRSYSPFNP-SPS----PAPSP    
 7 7165.AGAP005021-PA_from_816_to  62.2%  16.8%     -------QINTPYAPHTPGN--MFNADN-YSPYQA-SPN----PSPSP    
 8 8364.ENSXETP00000006329_from_2  68.6%  16.1%     VP---SPQVNAPYHPQTPGTPAMYNTDQ-FSPYAAPSPQGSYQPSPSP    
 9 6239.K08E4.1_from_812_to_920    60.3%  18.1%     TE------GGRTPAYGSMDN-----SRTPAYD----------DSGRTP    
10 4952.YALI0C11561g_from_814_to_  72.4%  20.9%     AT---PGEMMGAPTPGAAHHPWEDSAPTPAAYNDARTPGVYDPRGSGP    
11 4932.YML010W_from_902_to_1033   71.2%  13.0%     -------GDRSAYGGASTWGGNN------NNKSTR-------DGGASA    
12 5478.CAGL0H04697g_from_853_to_  69.9%  12.4%     -------GDRSTYGGASTWG----------NNAT---------GGTST    
13 33169.AGOS_ADR187W_from_799_to  71.8%  11.2%     -------GDRSAYGGASTWGAAGGASAWGGNKSHHRP-----DGSNST    
14 28985.KLLA0B00891g_from_855_to  70.5%  13.6%     -------GNKSSYGGTSTWGGNQGGVSAWGGSGNKSQ-----RSKNTG    
15 7227.CG7360-PA_from_67_to_192   70.5%  14.5%     --------QASAFGAPAPAVGTVAPTFSFATPAT---------SAPTT    
16 5691.Tb11.01.3690_from_41_to_1  59.0%  12.9%     -----------MFTGATPAAG-MAFGATPNYQF----------EGTTP    
17 5691.Tb11.01.2885_from_1283_to  91.0%  16.0%     VPGHVSSPQVAPFGSAATSHVFQSSSFSSIAGN----------YKATP    
18 6239.K08E4.1_from_926_to_1071   75.6%  16.8%     NP-----ATPGAYHVDTPGFAAPMTPGSGGAYDQY--------VAPSP    
19 43179.ENSSTOP00000004427_from_  67.3%  17.1%     RS--------RSRTPGRRSGRSRSRTPARRGRS----------RSRTP    
   consensus/100%                                   .............t..t.............................ss    
   consensus/90%                                    .............ts.s...........................t.os    
   consensus/80%                                    ...........shsssssht.....s....s.............usos    
   consensus/70%                                    ..........tsasssosss....ss.s..s............susoP